Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001039', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001039' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001039' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001039' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001039' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001039', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001039' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001039' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001039' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001039' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001039', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001039' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001039' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001039' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001039' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001039', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001039' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001039', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '585', 'num_species' => '96' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' ) ), 'genes' => array( 'A04p29290' => 'bna', 'A05p07790' => 'bna', 'Aa31LG5G23220' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.4085' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5813' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1394' => 'aag', 'Actinidia14618' => 'ach', 'Actinidia16525' => 'ach', 'Actinidia17399' => 'ach', 'Actinidia20751' => 'ach', 'Actinidia21148' => 'ach', 'Actinidia24928' => 'ach', 'Actinidia32529' => 'ach', 'Ah.06g191670' => 'amhyb', 'AL4G35330' => 'aly', 'AL4G35380' => 'aly', 'Aqoxy2G00829' => 'aox', 'Aqoxy2G03485' => 'aox', 'Aqoxy5G00381' => 'aox', 'Aqoxy5G00382' => 'aox', 'Aqoxy5G02446' => 'aox', 'Aqoxy6G01919' => 'aox', 'Aqoxy7G02065' => 'aox', 'arahy.Tifrunner.gnm1.ann1.AB3QW9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.J4PCYS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K199Z5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LIU795' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB0CLU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UB9N1X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W2FYD0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WRP019' => 'arhy', 'AT2G38290' => 'ath', 'ATR0584G108' => 'atr', 'ATR0661G275' => 'atr', 'ATR0661G505' => 'atr', 'ATR0665G278' => 'atr', 'ATR0681G223' => 'atr', 'Atru.chr2.809' => 'acertr', 'Atru.chr3.916' => 'acertr', 'Atru.chr3.921' => 'acertr', 'Atru.chr4.1185' => 'acertr', 'Atru.chr5.1535' => 'acertr', 'Atru.chr7.2378' => 'acertr', 'Atru.chr8.2291' => 'acertr', 'Atru.ctg1436.18' => 'acertr', 'AUR62004789' => 'cqu', 'AUR62039048' => 'cqu', 'BcaB02g06627' => 'bca', 'BcaB02g09211' => 'bca', 'BcaB06g27236' => 'bca', 'BcaB06g29040' => 'bca', 'BcaB07g32974' => 'bca', 'BcaC02g07483' => 'bca', 'BcaC02g11967' => 'bca', 'BcaC08g47171' => 'bca', 'BolC4t22550H' => 'bol', 'BolC4t28157H' => 'bol', 'BraA04t18397Z' => 'bra', 'BraA05t19748Z' => 'bra', 'C04p09440' => 'bna', 'C04p66550' => 'bna', 'CAN.G134.102' => 'can', 'CAN.G354.68' => 'can', 'CAN.G605.4' => 'can', 'CAN.G823.8' => 'can', 'CAN.G98.26' => 'can', 'CANSAT25G2514' => 'cansat', 'CANSAT25G3850' => 'cansat', 'CANSAT35G0882' => 'cansat', 'CANSAT35G1280' => 'cansat', 'CANSAT54G1134' => 'cansat', 'CARHR132870' => 'chi', 'Carub.0004s2024' => 'cru', 'Ca_03643_v3' => 'car', 'Ca_07668_v3' => 'car', 'Ca_09419_v3' => 'car', 'Ca_17602_v3' => 'car', 'Ca_27074_v3' => 'car', 'Cc02_g30580' => 'ccan', 'Cc06_g01000' => 'ccan', 'Cc06_g01010' => 'ccan', 'Cc07_g11400' => 'ccan', 'Cc07_g19360' => 'ccan', 'Cc07_g19370' => 'ccan', 'Cc11_g01840' => 'ccan', 'CDE04G2907' => 'cde', 'CDE08G1575' => 'cde', 'Cfa006430' => 'cfa', 'Cfa007036' => 'cfa', 'Cfa017160' => 'cfa', 'Cfa017162' => 'cfa', 'Cfa017181' => 'cfa', 'Cfa021861' => 'cfa', 'Cfa021931' => 'cfa', 'Cfa021932' => 'cfa', 'Cfa022072' => 'cfa', 'Cfa025300' => 'cfa', 'Ciclev10003499m.g' => 'ccl', 'Ciclev10010379m.g' => 'ccl', 'Ciclev10011595m.g' => 'ccl', 'Ciclev10023275m.g' => 'ccl', 'Ciclev10025453m.g' => 'ccl', 'Ciclev10026923m.g' => 'ccl', 'CiPaw.03G114700' => 'cil', 'CiPaw.04G077000' => 'cil', 'CiPaw.09G212700' => 'cil', 'CiPaw.09G212800' => 'cil', 'CiPaw.10G101600' => 'cil', 'CiPaw.10G159100' => 'cil', 'ClCG01G020650' => 'cla', 'ClCG08G013070' => 'cla', 'ClCG10G022370' => 'cla', 'COL.COLO4_09173' => 'col', 'COL.COLO4_14491' => 'col', 'COL.COLO4_15335' => 'col', 'COL.COLO4_22502' => 'col', 'COL.COLO4_32297' => 'col', 'Cpa.g.sc120.31' => 'cpa', 'Cpa.g.sc437.2' => 'cpa', 'Cpa.g.sc6.321' => 'cpa', 'Cpa.g.sc6.322' => 'cpa', 'CsaV3_2G031810' => 'csa', 'CsaV3_3G033490' => 'csa', 'CsaV3_6G047560' => 'csa', 'CSS0001725' => 'camsi', 'CSS0010086' => 'camsi', 'CSS0012200' => 'camsi', 'CSS0021429' => 'camsi', 'CSS0025228' => 'camsi', 'CSS0025285' => 'camsi', 'CSS0030121' => 'camsi', 'CSS0034487' => 'camsi', 'CSS0035111' => 'camsi', 'DCAR_002694' => 'dca', 'DCAR_003052' => 'dca', 'DCAR_005856' => 'dca', 'DCAR_006236' => 'dca', 'DCAR_013069' => 'dca', 'DCAR_013197' => 'dca', 'DCAR_015368' => 'dca', 'DCAR_017155' => 'dca', 'DCAR_028872' => 'dca', 'Dinv00119' => 'din', 'Dinv00120' => 'din', 'Dinv03113' => 'din', 'Dinv08451' => 'din', 'Dinv08453' => 'din', 'Dinv08454' => 'din', 'Dinv08543' => 'din', 'Dinv10033' => 'din', 'Dinv30176' => 'din', 'Dinv34554' => 'din', 'Duzib093G0873' => 'dzi', 'Duzib106G0697' => 'dzi', 'Duzib128G0073' => 'dzi', 'Duzib133G0333' => 'dzi', 'Duzib138G0107' => 'dzi', 'Duzib147G0202' => 'dzi', 'Duzib187G1124' => 'dzi', 'Duzib213G0558' => 'dzi', 'Duzib264G0545' => 'dzi', 'Duzib264G1160' => 'dzi', 'ECA233G1865' => 'eca', 'ECA236G1672' => 'eca', 'ECA240G2771' => 'eca', 'ECA246G0010' => 'eca', 'ECA246G1923' => 'eca', 'ECA246G4171' => 'eca', 'EL10Ac4g08944' => 'bvu', 'Eucgr.A00596' => 'egr', 'Eucgr.C01787' => 'egr', 'Eucgr.H04341' => 'egr', 'Eucgr.H05065' => 'egr', 'Eucgr.H05067' => 'egr', 'Eucgr.I00038' => 'egr', 'Eucgr.I02296' => 'egr', 'Eucgr.K03320' => 'egr', 'FAN02G2465' => 'fan', 'FAN04G1686' => 'fan', 'FAN05G4834' => 'fan', 'FAN08G0859' => 'fan', 'FAN09G3256' => 'fan', 'FAN13G0896' => 'fan', 'FAN14G5423' => 'fan', 'FAN15G0646' => 'fan', 'FAN18G4372' => 'fan', 'FAN19G0428' => 'fan', 'FAN19G0507' => 'fan', 'FAN19G1353' => 'fan', 'FAN20G0656' => 'fan', 'FAN23G2060' => 'fan', 'FAN23G2702' => 'fan', 'FAN24G0824' => 'fan', 'FAN26G2857' => 'fan', 'FAN27G2771' => 'fan', 'FAN28G0100' => 'fan', 'FAN28G0795' => 'fan', 'FAN28G1990' => 'fan', 'FvH4_1g10970' => 'fve', 'FvH4_1g25720' => 'fve', 'FvH4_2g29590' => 'fve', 'FvH4_5g30820' => 'fve', 'FvH4_6g11040' => 'fve', 'Glyma.01G123400' => 'gma', 'Glyma.02G043700' => 'gma', 'Glyma.02G143600' => 'gma', 'Glyma.05G196500' => 'gma', 'Glyma.07G153800' => 'gma', 'Glyma.09G281600' => 'gma', 'Glyma.10G030700' => 'gma', 'Glyma.10G030800' => 'gma', 'Glyma.18G204800' => 'gma', 'Glyma.19G244400' => 'gma', 'Glyma.20G004100' => 'gma', 'Gohir.A01G228600' => 'ghi', 'Gohir.A04G094400' => 'ghi', 'Gohir.A08G062900' => 'ghi', 'Gohir.A10G155000' => 'ghi', 'Gohir.A11G126000' => 'ghi', 'Gohir.A12G058300' => 'ghi', 'Gohir.A13G170200' => 'ghi', 'Gohir.D01G084800' => 'ghi', 'Gohir.D01G218500' => 'ghi', 'Gohir.D04G133800' => 'ghi', 'Gohir.D08G071950' => 'ghi', 'Gohir.D10G110900' => 'ghi', 'Gohir.D11G131300' => 'ghi', 'Gohir.D12G058200' => 'ghi', 'Gohir.D13G175600' => 'ghi', 'Gorai.002G110400' => 'gra', 'Gorai.002G265200' => 'gra', 'Gorai.004G076100' => 'gra', 'Gorai.007G140600' => 'gra', 'Gorai.008G061500' => 'gra', 'Gorai.011G122300' => 'gra', 'Gorai.012G117600' => 'gra', 'Gorai.013G201000' => 'gra', 'GSVIVG01003136001' => 'vvi', 'GSVIVG01005492001' => 'vvi', 'GSVIVG01021796001' => 'vvi', 'GSVIVG01022397001' => 'vvi', 'GSVIVG01022402001' => 'vvi', 'GSVIVG01030328001' => 'vvi', 'GSVIVG01030330001' => 'vvi', 'GSVIVG01035812001' => 'vvi', 'HanXRQChr02g0050761' => 'han', 'HanXRQChr03g0079401' => 'han', 'HanXRQChr04g0113901' => 'han', 'HanXRQChr04g0127841' => 'han', 'HanXRQChr08g0214871' => 'han', 'HanXRQChr09g0245451' => 'han', 'Haze_03696' => 'cav', 'Haze_04354' => 'cav', 'Haze_04632' => 'cav', 'Haze_21043' => 'cav', 'Haze_21044' => 'cav', 'Haze_25498' => 'cav', 'Hma1.2p1_0057F.1_g032050' => 'hma', 'Hma1.2p1_0315F.1_g122650' => 'hma', 'Hma1.2p1_0902F.1_g234790' => 'hma', 'HPP92_013763' => 'vpl', 'HPP92_017663' => 'vpl', 'Lalb_Chr01g0023211' => 'lal', 'Lalb_Chr07g0184111' => 'lal', 'Lalb_Chr19g0124341' => 'lal', 'Lj1g0007876' => 'lja', 'Lj1g0012871' => 'lja', 'Lj2A1162T38' => 'lonja', 'Lj2A487T67' => 'lonja', 'Lj2A591T40' => 'lonja', 'Lj2A70T39' => 'lonja', 'Lj2g0004444' => 'lja', 'Lj3C416G1' => 'lonja', 'Lj3g0009637' => 'lja', 'Lj4A226T90' => 'lonja', 'Lj4g0007055' => 'lja', 'Lj7A489T31' => 'lonja', 'Lj7A718T62' => 'lonja', 'Lj8A620G37' => 'lonja', 'Lsat_1_v5_gn_3_71601' => 'lsa', 'Lsat_1_v5_gn_5_149621' => 'lsa', 'Lsat_1_v5_gn_5_31560' => 'lsa', 'Lsat_1_v5_gn_6_22140' => 'lsa', 'Lsat_1_v5_gn_7_56360' => 'lsa', 'Lsat_1_v5_gn_8_94481' => 'lsa', 'Manes.01G151600' => 'mes', 'Manes.05G082500' => 'mes', 'Manes.08G095000' => 'mes', 'Manes.08G134200' => 'mes', 'Manes.09G109000' => 'mes', 'Manes.13G079100' => 'mes', 'Manes.16G119600' => 'mes', 'Mapoly0028s0091' => 'mpo', 'Mapoly0030s0156' => 'mpo', 'Mapoly0080s0061' => 'mpo', 'Mapoly0174s0008' => 'mpo', 'Mapoly0192s0010' => 'mpo', 'Mapoly0192s0011' => 'mpo', 'Mapoly0192s0012' => 'mpo', 'Mapoly0192s0013' => 'mpo', 'Mapoly0192s0015' => 'mpo', 'Mapoly0213s0001' => 'mpo', 'Mapoly0213s0002' => 'mpo', 'Mapoly2061s0001' => 'mpo', 'MBI01_g07126_MAGBIO' => 'mbi', 'MBI01_g37951_MAGBIO' => 'mbi', 'MBI01_g37952_MAGBIO' => 'mbi', 'MBI03_g18942_MAGBIO' => 'mbi', 'MBI03_g45001_MAGBIO' => 'mbi', 'MBI04_g38136_MAGBIO' => 'mbi', 'MBI05_g03614_MAGBIO' => 'mbi', 'MBI09_g01926_MAGBIO' => 'mbi', 'MBI11_g00105_MAGBIO' => 'mbi', 'MBI15_g28809_MAGBIO' => 'mbi', 'MBI16_g07668_MAGBIO' => 'mbi', 'MCO10G129' => 'mco', 'MCO12G101' => 'mco', 'MCO15G448' => 'mco', 'MD02G1122700' => 'mdo', 'MD03G1256600' => 'mdo', 'MD03G1256800' => 'mdo', 'MD04G1162200' => 'mdo', 'MD08G1145400' => 'mdo', 'MD11G1277400' => 'mdo', 'MD12G1174700' => 'mdo', 'MD15G1121000' => 'mdo', 'MD15G1139800' => 'mdo', 'Medtr1g036410' => 'mtr', 'Medtr4g017820' => 'mtr', 'Medtr7g069640' => 'mtr', 'Medtr7g115050' => 'mtr', 'Medtr8g074750' => 'mtr', 'Medtr8g095040' => 'mtr', 'MELO3C007948.2' => 'cme', 'MELO3C009140.2' => 'cme', 'MELO3C011231.2' => 'cme', 'Migut.B01084' => 'egut', 'Migut.D00348' => 'egut', 'Migut.E01475' => 'egut', 'Migut.L02036' => 'egut', 'Migut.O00210' => 'egut', 'MSTRG.10204' => 'ama', 'MSTRG.26827' => 'ama', 'Nitab4.5_0000147g0010' => 'nta', 'Nitab4.5_0000151g0160' => 'nta', 'Nitab4.5_0000187g0030' => 'nta', 'Nitab4.5_0000444g0190' => 'nta', 'Nitab4.5_0001561g0040' => 'nta', 'Nitab4.5_0001592g0130' => 'nta', 'Nitab4.5_0001663g0140' => 'nta', 'Nitab4.5_0001669g0030' => 'nta', 'Nitab4.5_0001685g0010' => 'nta', 'Nitab4.5_0002634g0020' => 'nta', 'Nitab4.5_0005606g0040' => 'nta', 'Nitab4.5_0009217g0020' => 'nta', 'Nitab4.5_0012228g0020' => 'nta', 'Nn2g10932' => 'nnu', 'Nn2g13201' => 'nnu', 'Nn2g13518' => 'nnu', 'Nn3g21583' => 'nnu', 'Nn4g24737' => 'nnu', 'Nn5g27866' => 'nnu', 'Oeu011512.1' => 'oeu', 'Oeu014028.1' => 'oeu', 'Oeu025776.1' => 'oeu', 'Oeu030205.1' => 'oeu', 'Oeu034371.1' => 'oeu', 'Oeu038437.1' => 'oeu', 'Oeu038735.1' => 'oeu', 'Oeu053139.1' => 'oeu', 'Os01g0831300' => 'osa', 'Os01g0831900' => 'osa', 'Os01g0870300' => 'osa', 'Os02g0550800' => 'osa', 'Os03g0749000' => 'osa', 'Os03g0838400' => 'osa', 'Os05g0468700' => 'osa', 'Peaxi162Scf00014g00010' => 'pax', 'Peaxi162Scf00165g00213' => 'pax', 'Peaxi162Scf00282g00327' => 'pax', 'Peaxi162Scf00341g00054' => 'pax', 'Peaxi162Scf00341g00514' => 'pax', 'Peaxi162Scf00341g00515' => 'pax', 'Peaxi162Scf00718g00117' => 'pax', 'Peaxi162Scf01286g00133' => 'pax', 'PGR004G1160' => 'pgr', 'PGR031G0141' => 'pgr', 'PGR031G2846' => 'pgr', 'PGR044G1569' => 'pgr', 'PGR102G2044' => 'pgr', 'PGR119G0683' => 'pgr', 'PGR119G1553' => 'pgr', 'PGSC0003DMG400019338' => 'stu', 'PGSC0003DMG400022523' => 'stu', 'PGSC0003DMG400023149' => 'stu', 'PGSC0003DMG400046020' => 'stu', 'PGSC0003DMG401015894' => 'stu', 'Phvul.002G277000' => 'pvu', 'Phvul.003G006300' => 'pvu', 'Phvul.003G267400' => 'pvu', 'Phvul.006G101400' => 'pvu', 'Phvul.007G175600' => 'pvu', 'Phvul.008G094900' => 'pvu', 'Phvul.010G073700' => 'pvu', 'Potri.001G305400' => 'ptr', 'Potri.002G047000' => 'ptr', 'Potri.005G054900' => 'ptr', 'Potri.005G106000' => 'ptr', 'Potri.005G216000' => 'ptr', 'Potri.006G102800' => 'ptr', 'Potri.006G247800' => 'ptr', 'Potri.013G040401' => 'ptr', 'Potri.016G121400' => 'ptr', 'Potri.018G033500' => 'ptr', 'Potri.019G000800' => 'ptr', 'Potri.019G023010' => 'ptr', 'Potri.019G023012' => 'ptr', 'Potri.019G023022' => 'ptr', 'Pp3c10_10460' => 'ppa', 'Pp3c12_11680' => 'ppa', 'Pp3c14_13820' => 'ppa', 'Pp3c16_12080' => 'ppa', 'Pp3c16_22550' => 'ppa', 'Pp3c19_2270' => 'ppa', 'Pp3c22_5530' => 'ppa', 'Pp3c25_12520' => 'ppa', 'Pp3c2_15630' => 'ppa', 'Pp3c5_13670' => 'ppa', 'Pp3c6_17000' => 'ppa', 'PRCOL_00001159' => 'pco', 'Prupe.1G473600' => 'ppe', 'Prupe.4G283900' => 'ppe', 'Prupe.4G284200' => 'ppe', 'Prupe.4G284700' => 'ppe', 'Prupe.4G285000' => 'ppe', 'Prupe.4G285300' => 'ppe', 'Prupe.4G285400' => 'ppe', 'Prupe.6G281900' => 'ppe', 'Prupe.7G175800' => 'ppe', 'Prupe.8G233700' => 'ppe', 'Psat0s3671g0040' => 'psa', 'Psat0s3817g0120' => 'psa', 'Psat3g125560' => 'psa', 'Psat6g098680' => 'psa', 'Psat7g042560' => 'psa', 'PSO017G4079' => 'pso', 'PSO017G4139' => 'pso', 'PSO063G7465' => 'pso', 'PSO170G4009' => 'pso', 'PSO210G1223' => 'pso', 'PSO339G0870' => 'pso', 'PSO339G3839' => 'pso', 'PSO339G5799' => 'pso', 'PSO455G0175' => 'pso', 'PSO461G0038' => 'pso', 'PSO541G0037' => 'pso', 'PSO675G7093' => 'pso', 'PSO801G0140' => 'pso', 'PSO801G0300' => 'pso', 'PSO801G0356' => 'pso', 'QL02p022569' => 'qlo', 'QL06p052265' => 'qlo', 'QL07p034401' => 'qlo', 'QL07p034417' => 'qlo', 'QL07p034423' => 'qlo', 'QL10p039311' => 'qlo', 'QL10p039442' => 'qlo', 'RcHm_v2.0_Chr2g0098231' => 'rch', 'RcHm_v2.0_Chr3g0462351' => 'rch', 'RcHm_v2.0_Chr3g0484601' => 'rch', 'RcHm_v2.0_Chr3g0484621' => 'rch', 'RcHm_v2.0_Chr3g0484631' => 'rch', 'RcHm_v2.0_Chr3g0484641' => 'rch', 'RcHm_v2.0_Chr6g0262941' => 'rch', 'RcHm_v2.0_Chr6g0298571' => 'rch', 'Rhsim04G0126000' => 'rsi', 'Rhsim05G0221600' => 'rsi', 'Rhsim05G0221700' => 'rsi', 'Rhsim08G0000600' => 'rsi', 'Sabra02G0037900' => 'sbr', 'Sabra05G0086700' => 'sbr', 'Sabra06G0079100' => 'sbr', 'Sabra16G0117100' => 'sbr', 'Sabra16G0191700' => 'sbr', 'Sabra18G0034400' => 'sbr', 'SalBow4G0774' => 'sbo', 'SalBow4G1003' => 'sbo', 'SalBow4G1006' => 'sbo', 'SalBow4G2832' => 'sbo', 'SalBow5G1112' => 'sbo', 'SalBow5G1660' => 'sbo', 'SalBow5G2383' => 'sbo', 'SalBow5G2987' => 'sbo', 'SalBow5G3186' => 'sbo', 'SalBow5G3899' => 'sbo', 'SalBow7G1466' => 'sbo', 'SalBow8G5060' => 'sbo', 'Sc06g0003080' => 'sci', 'Sed0012757' => 'sed', 'Sed0013498' => 'sed', 'Sed0017453' => 'sed', 'SEGI_01422' => 'sgi', 'SEGI_02530' => 'sgi', 'SEGI_09229' => 'sgi', 'SEGI_10352' => 'sgi', 'SEGI_17648' => 'sgi', 'SEGI_18684' => 'sgi', 'SEGI_22615' => 'sgi', 'SEGI_23294' => 'sgi', 'SEGI_23704' => 'sgi', 'SEGI_23919' => 'sgi', 'SEGI_24353' => 'sgi', 'SEGI_33330' => 'sgi', 'SEGI_33435' => 'sgi', 'SGA_v2.0_scaffold240G44075' => 'sas', 'SGA_v2.0_scaffold81G26051' => 'sas', 'SMO115G0024' => 'smo', 'SMO145G0250' => 'smo', 'SMO351G0587' => 'smo', 'Solyc01g097370.1' => 'sly', 'Solyc03g033300.3' => 'sly', 'Solyc08g067080.3' => 'sly', 'Solyc09g065740.2' => 'sly', 'Solyc10g076480.2' => 'sly', 'Sopen01g041040' => 'spe', 'Sopen03g006080' => 'spe', 'Sopen08g021030' => 'spe', 'Sopen09g027490' => 'spe', 'Sopen10g028130' => 'spe', 'Sp4g20570' => 'spa', 'TAR131G0004' => 'tar', 'TAR131G0007' => 'tar', 'TAR362G0710' => 'tar', 'TAR381G0818' => 'tar', 'TAR381G1368' => 'tar', 'TAR383G0354' => 'tar', 'TAR383G0508' => 'tar', 'TAR623G1270' => 'tar', 'TAR623G1762' => 'tar', 'TAR624G0213' => 'tar', 'TAR625G0607' => 'tar', 'TAR625G0884' => 'tar', 'TAR625G1279' => 'tar', 'TAR626G0437' => 'tar', 'TAR626G0780' => 'tar', 'TAR636G3638' => 'tar', 'THA.LOC104805997' => 'tha', 'Thecc.01G010600' => 'tca', 'Thecc.01G233900' => 'tca', 'Thecc.01G270000' => 'tca', 'Thecc.05G010400' => 'tca', 'Thecc.05G284700' => 'tca', 'Thecc.07G181000' => 'tca', 'Thhalv10016571m.g' => 'esa', 'TPR.G21325' => 'tpr', 'TPR.G32015' => 'tpr', 'TPR.G33460' => 'tpr', 'TPR.G8222' => 'tpr', 'TPR.G8233' => 'tpr', 'TWI12G0287' => 'twi', 'TWI12G0660' => 'twi', 'TWI14G0857' => 'twi', 'TWI18G0620' => 'twi', 'TWI53G1417' => 'twi', 'TWI74G1189' => 'twi', 'TWI79G1309' => 'twi', 'unitig_37.g12357' => 'ugi', 'unitig_37.g12655' => 'ugi', 'unitig_37.g12656' => 'ugi', 'unitig_46.g18660' => 'ugi', 'vmacro08896' => 'vma', 'vmacro18684' => 'vma', 'vmacro20306' => 'vma', 'vmacro20307' => 'vma', 'VMungo0251G2659' => 'vmu', 'VMungo0251G3549' => 'vmu', 'VMungo0251G3614' => 'vmu', 'VMungo0540G2080' => 'vmu', 'VMungo0720G3026' => 'vmu', 'VMungo1383G1373' => 'vmu', 'Zm00001eb063910' => 'zma', 'Zm00001eb214890' => 'zma', 'Zm00001eb243410' => 'zma', 'Zm00001eb289990' => 'zma', 'Zm00001eb366590' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001039' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001039' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001039' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001039' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151