Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000981', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000981' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000981' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000981' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000981' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000981', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000981' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000981' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000981' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000981' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000981', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000981' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000981' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000981' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000981' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000981', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000981' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000981', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '613', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' ) ), 'genes' => array( 'A02p20900' => 'bna', 'A03p44120' => 'bna', 'A06p17200' => 'bna', 'A07p15240' => 'bna', 'A07p42440' => 'bna', 'A08p29050' => 'bna', 'Aa31LG4G6870' => 'aar', 'Aa31LG7G5250' => 'aar', 'Aa31sc18G80' => 'aar', 'Aa31sc18G90' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_344.4715' => 'aag', 'Actinidia00234' => 'ach', 'Actinidia00237' => 'ach', 'Actinidia01154' => 'ach', 'Actinidia01155' => 'ach', 'Actinidia10657' => 'ach', 'Actinidia12428' => 'ach', 'Actinidia17140' => 'ach', 'Actinidia22867' => 'ach', 'Actinidia38962' => 'ach', 'Actinidia38964' => 'ach', 'Ah.01g006140' => 'amhyb', 'Ah.01g008360' => 'amhyb', 'Ah.05g167810' => 'amhyb', 'Ah.16g109070' => 'amhyb', 'AL1G34200' => 'aly', 'AL2G36940' => 'aly', 'AL3G40930' => 'aly', 'AL3G41060' => 'aly', 'AL3G41430' => 'aly', 'AL5G21260' => 'aly', 'AL5G21560' => 'aly', 'AL5G21570' => 'aly', 'Aqoxy5G00950' => 'aox', 'Aqoxy5G02122' => 'aox', 'Aqoxy5G02124' => 'aox', 'Aqoxy5G02131' => 'aox', 'Aqoxy5G02151' => 'aox', 'Aqoxy6G01608' => 'aox', 'arahy.Tifrunner.gnm1.ann1.8KMA2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JAAI7L' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TF3CHY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ZLNV7B' => 'arhy', 'AT1G21140' => 'ath', 'AT1G76800' => 'ath', 'AT3G25190' => 'ath', 'AT3G43630' => 'ath', 'AT3G43660' => 'ath', 'ATR0176G001' => 'atr', 'ATR0605G255' => 'atr', 'ATR0716G072' => 'atr', 'ATR0733G196' => 'atr', 'ATR0772G127' => 'atr', 'Atru.chr10.2172' => 'acertr', 'Atru.chr12.2' => 'acertr', 'Atru.chr13.2177' => 'acertr', 'Atru.chr6.1213' => 'acertr', 'AUR62013026' => 'cqu', 'AUR62013555' => 'cqu', 'AUR62013556' => 'cqu', 'AUR62013567' => 'cqu', 'AUR62013568' => 'cqu', 'AUR62026723' => 'cqu', 'AUR62026724' => 'cqu', 'AUR62026725' => 'cqu', 'AUR62026726' => 'cqu', 'AUR62026727' => 'cqu', 'AUR62026728' => 'cqu', 'AUR62043664' => 'cqu', 'BcaB03g12830' => 'bca', 'BcaB03g14277' => 'bca', 'BcaB05g25011' => 'bca', 'BcaB07g32107' => 'bca', 'BcaB08g34444' => 'bca', 'BcaC01g03236' => 'bca', 'BcaC01g03237' => 'bca', 'BcaC03g15704' => 'bca', 'BcaC05g26022' => 'bca', 'BcaC05g26023' => 'bca', 'BcaC06g34880' => 'bca', 'BcaC07g39080' => 'bca', 'BcaC08g47184' => 'bca', 'BcaC08g47185' => 'bca', 'BolC2t09422H' => 'bol', 'BolC3t17736H' => 'bol', 'BolC5t30686H' => 'bol', 'BolC6t40124H' => 'bol', 'BolC7t42755H' => 'bol', 'BolC8t49697H' => 'bol', 'BraA02t07121Z' => 'bra', 'BraA03t13540Z' => 'bra', 'BraA06t24822Z' => 'bra', 'BraA07t29263Z' => 'bra', 'BraA07t31769Z' => 'bra', 'BraA08t34840Z' => 'bra', 'C02p32760' => 'bna', 'C03p54490' => 'bna', 'C05p19890' => 'bna', 'C06p51000' => 'bna', 'C07p22390' => 'bna', 'C08p20650' => 'bna', 'CAN.G175.12' => 'can', 'CAN.G208.1' => 'can', 'CAN.G361.21' => 'can', 'CAN.G523.101' => 'can', 'CAN.G523.102' => 'can', 'CAN.G523.103' => 'can', 'CAN.G883.26' => 'can', 'CANSAT11G1140' => 'cansat', 'CANSAT11G1732' => 'cansat', 'CANSAT11G2663' => 'cansat', 'CANSAT25G1635' => 'cansat', 'CANSAT54G0132' => 'cansat', 'CARHR021590' => 'chi', 'CARHR070330' => 'chi', 'CARHR070340' => 'chi', 'CARHR101540' => 'chi', 'Carub.0001s2058' => 'cru', 'Carub.0002s2371' => 'cru', 'Carub.0003s2556' => 'cru', 'Carub.0005s0935' => 'cru', 'Carub.0005s0936' => 'cru', 'Carub.0005s0949' => 'cru', 'Ca_00108_v3' => 'car', 'Ca_18327_v3' => 'car', 'Ca_18328_v3' => 'car', 'Ca_18329_v3' => 'car', 'Ca_19933_v3' => 'car', 'Ca_25989_v3' => 'car', 'CBR_g23871' => 'cbr', 'CBR_g29394' => 'cbr', 'CBR_g31774' => 'cbr', 'CBR_g50723' => 'cbr', 'Cc02_g21980' => 'ccan', 'Cc10_g14590' => 'ccan', 'CDE04G2260' => 'cde', 'CDE06G1848' => 'cde', 'CDE12G0260' => 'cde', 'Cfa004114' => 'cfa', 'Cfa005573' => 'cfa', 'Cfa018332' => 'cfa', 'Ciclev10002398m.g' => 'ccl', 'Ciclev10013873m.g' => 'ccl', 'Ciclev10017079m.g' => 'ccl', 'Ciclev10030208m.g' => 'ccl', 'CiPaw.05G039600' => 'cil', 'CiPaw.05G039700' => 'cil', 'CiPaw.05G040100' => 'cil', 'CiPaw.06G150600' => 'cil', 'CiPaw.15G017100' => 'cil', 'CiPaw.16G013800' => 'cil', 'ClCG08G006940' => 'cla', 'ClCG09G009650' => 'cla', 'ClCG09G014180' => 'cla', 'COL.COLO4_17924' => 'col', 'COL.COLO4_19392' => 'col', 'COL.COLO4_19769' => 'col', 'COL.COLO4_20876' => 'col', 'COL.COLO4_35536' => 'col', 'COL.COLO4_37845' => 'col', 'Cpa.g.sc2.47' => 'cpa', 'Cpa.g.sc2.49' => 'cpa', 'Cpa.g.sc21.186' => 'cpa', 'Cpa.g.sc6.375' => 'cpa', 'Cre02.g099500' => 'cre', 'Cre02.g107550' => 'cre', 'CsaV3_1G019670' => 'csa', 'CsaV3_6G005300' => 'csa', 'CsaV3_6G037370' => 'csa', 'CsaV3_7G025140' => 'csa', 'CSS0000760' => 'camsi', 'CSS0002212' => 'camsi', 'CSS0006866' => 'camsi', 'CSS0024560' => 'camsi', 'CSS0024983' => 'camsi', 'CSS0029365' => 'camsi', 'CSS0038573' => 'camsi', 'CSS0041922' => 'camsi', 'DCAR_001348' => 'dca', 'DCAR_001809' => 'dca', 'DCAR_008135' => 'dca', 'DCAR_008136' => 'dca', 'DCAR_016699' => 'dca', 'DCAR_021832' => 'dca', 'DCAR_029218' => 'dca', 'DCAR_029219' => 'dca', 'Dinv24222' => 'din', 'Dinv24236' => 'din', 'Dinv24239' => 'din', 'Dinv24240' => 'din', 'Dinv24241' => 'din', 'Dinv25850' => 'din', 'Dinv28291' => 'din', 'Dinv41093' => 'din', 'Duzib041G0518' => 'dzi', 'Duzib052G0742' => 'dzi', 'Duzib093G0713' => 'dzi', 'Duzib116G0912' => 'dzi', 'Duzib132G0014' => 'dzi', 'Duzib132G0458' => 'dzi', 'Duzib132G0621' => 'dzi', 'Duzib132G1123' => 'dzi', 'Duzib147G0899' => 'dzi', 'Duzib205G0079' => 'dzi', 'Duzib248G0879' => 'dzi', 'ECA234G1523' => 'eca', 'ECA234G3318' => 'eca', 'ECA234G3953' => 'eca', 'ECA234G4549' => 'eca', 'ECA236G0786' => 'eca', 'ECA240G0970' => 'eca', 'ECA246G3690' => 'eca', 'EL10Ac1g01523' => 'bvu', 'EL10Ac1g01524' => 'bvu', 'EL10Ac1g01525' => 'bvu', 'EL10Ac1g01526' => 'bvu', 'EL10Ac1g01527' => 'bvu', 'EL10Ac9g21373' => 'bvu', 'Eucgr.C02475' => 'egr', 'Eucgr.F02714' => 'egr', 'Eucgr.I02184' => 'egr', 'Eucgr.I02193' => 'egr', 'Eucgr.I02698' => 'egr', 'Eucgr.I02699' => 'egr', 'Eucgr.I02700' => 'egr', 'Eucgr.L03379' => 'egr', 'FAN02G0495' => 'fan', 'FAN02G0602' => 'fan', 'FAN05G0062' => 'fan', 'FAN05G4084' => 'fan', 'FAN05G5469' => 'fan', 'FAN09G4330' => 'fan', 'FAN14G0364' => 'fan', 'FAN14G4690' => 'fan', 'FAN14G5253' => 'fan', 'FAN14G5769' => 'fan', 'FAN15G1726' => 'fan', 'FAN19G0072' => 'fan', 'FAN23G0475' => 'fan', 'FvH4_2g13960' => 'fve', 'FvH4_6g05360' => 'fve', 'FvH4_6g06150' => 'fve', 'Glyma.01G160600' => 'gma', 'Glyma.02G082500' => 'gma', 'Glyma.05G121300' => 'gma', 'Glyma.05G121400' => 'gma', 'Glyma.05G121500' => 'gma', 'Glyma.05G121600' => 'gma', 'Glyma.08G075900' => 'gma', 'Glyma.08G076000' => 'gma', 'Glyma.08G076100' => 'gma', 'Glyma.08G076300' => 'gma', 'Glyma.08G181900' => 'gma', 'Glyma.10G225900' => 'gma', 'Glyma.11G083300' => 'gma', 'Glyma.15G050400' => 'gma', 'Glyma.16G168200' => 'gma', 'Glyma.20G166100' => 'gma', 'Gohir.A01G011000' => 'ghi', 'Gohir.A03G066900' => 'ghi', 'Gohir.A04G112072' => 'ghi', 'Gohir.A04G112084' => 'ghi', 'Gohir.A04G112100' => 'ghi', 'Gohir.A04G112200' => 'ghi', 'Gohir.A05G242700' => 'ghi', 'Gohir.A10G099500' => 'ghi', 'Gohir.D01G011600' => 'ghi', 'Gohir.D03G093350' => 'ghi', 'Gohir.D04G152900' => 'ghi', 'Gohir.D04G153000' => 'ghi', 'Gohir.D04G153100' => 'ghi', 'Gohir.D04G153200' => 'ghi', 'Gohir.D05G244200' => 'ghi', 'Gohir.D10G088700' => 'ghi', 'Gorai.002G013500' => 'gra', 'Gorai.003G097300' => 'gra', 'Gorai.009G253300' => 'gra', 'Gorai.011G097600' => 'gra', 'Gorai.012G139700' => 'gra', 'Gorai.012G139800' => 'gra', 'Gorai.012G140000' => 'gra', 'Gorai.012G140100' => 'gra', 'GSVIVG01018716001' => 'vvi', 'GSVIVG01029754001' => 'vvi', 'GSVIVG01029755001' => 'vvi', 'GSVIVG01034896001' => 'vvi', 'HanXRQChr02g0040751' => 'han', 'HanXRQChr03g0068901' => 'han', 'HanXRQChr03g0074671' => 'han', 'HanXRQChr03g0074681' => 'han', 'HanXRQChr04g0108971' => 'han', 'HanXRQChr05g0133101' => 'han', 'HanXRQChr10g0289081' => 'han', 'HanXRQChr10g0294861' => 'han', 'HanXRQChr11g0337091' => 'han', 'HanXRQChr11g0337101' => 'han', 'HanXRQChr11g0337611' => 'han', 'HanXRQChr11g0337621' => 'han', 'HanXRQChr11g0337631' => 'han', 'HanXRQChr15g0484141' => 'han', 'HanXRQChr16g0514121' => 'han', 'HanXRQChr16g0514141' => 'han', 'Haze_10789' => 'cav', 'Haze_15299' => 'cav', 'Haze_17744' => 'cav', 'Hma1.2p1_0034F.1_g021600' => 'hma', 'Hma1.2p1_0217F.1_g091650' => 'hma', 'Hma1.2p1_1552F.1_g290200' => 'hma', 'HPP92_004388' => 'vpl', 'HPP92_004428' => 'vpl', 'HPP92_007408' => 'vpl', 'HPP92_009301' => 'vpl', 'HPP92_020997' => 'vpl', 'HPP92_021025' => 'vpl', 'Lalb_Chr01g0009641' => 'lal', 'Lalb_Chr02g0159201' => 'lal', 'Lalb_Chr02g0159211' => 'lal', 'Lalb_Chr03g0035251' => 'lal', 'Lalb_Chr07g0189361' => 'lal', 'Lalb_Chr08g0245581' => 'lal', 'Lalb_Chr12g0208581' => 'lal', 'Lalb_Chr18g0060721' => 'lal', 'Lalb_Chr20g0123221' => 'lal', 'Lj2A507G43' => 'lonja', 'Lj2g0002132' => 'lja', 'Lj4C245T11' => 'lonja', 'Lj4C694T6' => 'lonja', 'Lj4g0000524' => 'lja', 'Lj4g0001587' => 'lja', 'Lj4g0012417' => 'lja', 'Lj5C244T10' => 'lonja', 'Lj5C244T9' => 'lonja', 'Lj5g0010848' => 'lja', 'Lj6g0005483' => 'lja', 'Lj6g0010783' => 'lja', 'Lj9P316T39' => 'lonja', 'Lsat_1_v5_gn_1_6581' => 'lsa', 'Lsat_1_v5_gn_3_68360' => 'lsa', 'Lsat_1_v5_gn_5_105920' => 'lsa', 'Lsat_1_v5_gn_5_106261' => 'lsa', 'Lsat_1_v5_gn_5_106341' => 'lsa', 'Lsat_1_v5_gn_5_106361' => 'lsa', 'Lsat_1_v5_gn_5_106381' => 'lsa', 'Lsat_1_v5_gn_5_106481' => 'lsa', 'Lsat_1_v5_gn_5_106501' => 'lsa', 'Lsat_1_v5_gn_5_106521' => 'lsa', 'Lsat_1_v5_gn_7_80241' => 'lsa', 'Lsat_1_v5_gn_7_80320' => 'lsa', 'Lsat_1_v5_gn_7_80341' => 'lsa', 'Lsat_1_v5_gn_9_117781' => 'lsa', 'Manes.02G117518' => 'mes', 'Manes.02G178400' => 'mes', 'Manes.11G112800' => 'mes', 'Manes.18G073719' => 'mes', 'Manes.18G090800' => 'mes', 'Mapoly0102s0022' => 'mpo', 'MBI04_g07088_MAGBIO' => 'mbi', 'MBI04_g07089_MAGBIO' => 'mbi', 'MBI04_g18016_MAGBIO' => 'mbi', 'MBI04_g40154_MAGBIO' => 'mbi', 'MBI06_g04352_MAGBIO' => 'mbi', 'MBI10_g41347_MAGBIO' => 'mbi', 'MBI17_g13389_MAGBIO' => 'mbi', 'MBI17_g13391_MAGBIO' => 'mbi', 'MBI17_g13543_MAGBIO' => 'mbi', 'MBI17_g34052_MAGBIO' => 'mbi', 'MBI17_g34066_MAGBIO' => 'mbi', 'MBI17_g40263_MAGBIO' => 'mbi', 'MD04G1208900' => 'mdo', 'MD05G1023100' => 'mdo', 'MD10G1024000' => 'mdo', 'MD12G1223300' => 'mdo', 'MD12G1223400' => 'mdo', 'MD15G1227000' => 'mdo', 'Medtr0119s0010' => 'mtr', 'Medtr0119s0020' => 'mtr', 'Medtr1g099010' => 'mtr', 'Medtr2g008110' => 'mtr', 'Medtr4g094325' => 'mtr', 'Medtr4g094328' => 'mtr', 'Medtr4g094330' => 'mtr', 'Medtr4g094332' => 'mtr', 'Medtr4g094335' => 'mtr', 'Medtr6g034975' => 'mtr', 'MELO3C008350.2' => 'cme', 'MELO3C014380.2' => 'cme', 'MELO3C023714.2' => 'cme', 'Migut.B00647' => 'egut', 'Migut.B00648' => 'egut', 'Migut.C01003' => 'egut', 'Migut.K01210' => 'egut', 'Migut.N01015' => 'egut', 'Migut.N03222' => 'egut', 'MSTRG.16556' => 'ama', 'MSTRG.25319' => 'ama', 'MSTRG.26589' => 'ama', 'Nitab4.5_0000032g0220' => 'nta', 'Nitab4.5_0000249g0470' => 'nta', 'Nitab4.5_0002893g0030' => 'nta', 'Nitab4.5_0003536g0010' => 'nta', 'Nitab4.5_0008185g0010' => 'nta', 'Nitab4.5_0008185g0020' => 'nta', 'Nitab4.5_0008384g0010' => 'nta', 'Nn1g06115' => 'nnu', 'Nn1g06158' => 'nnu', 'Nn5g27445' => 'nnu', 'Nn5g27451' => 'nnu', 'Nn5g28706' => 'nnu', 'Nn7g37069' => 'nnu', 'Oeu000223.1' => 'oeu', 'Oeu000225.1' => 'oeu', 'Oeu000226.1' => 'oeu', 'Oeu000656.1' => 'oeu', 'Oeu000658.1' => 'oeu', 'Oeu014491.1' => 'oeu', 'Oeu018397.1' => 'oeu', 'Oeu025469.1' => 'oeu', 'Oeu040316.1' => 'oeu', 'Oeu051265.1' => 'oeu', 'Os02g0644200' => 'osa', 'Os04g0538400' => 'osa', 'Os04g0686800' => 'osa', 'Os11g0161900' => 'osa', 'Peaxi162Scf00001g00064' => 'pax', 'Peaxi162Scf00001g00065' => 'pax', 'Peaxi162Scf00001g00510' => 'pax', 'Peaxi162Scf00001g00530' => 'pax', 'Peaxi162Scf00287g00056' => 'pax', 'Peaxi162Scf00528g00419' => 'pax', 'Peaxi162Scf00823g00003' => 'pax', 'Peaxi162Scf00981g00024' => 'pax', 'Peaxi162Scf01290g00002' => 'pax', 'Peaxi162Scf01290g00012' => 'pax', 'Peaxi162Scf01290g00015' => 'pax', 'Peaxi162Scf01290g00016' => 'pax', 'Peaxi162Scf01290g00017' => 'pax', 'Peaxi162Scf01290g00018' => 'pax', 'Peaxi162Scf01290g00121' => 'pax', 'Peaxi162Scf01290g00128' => 'pax', 'Peaxi162Scf01290g00221' => 'pax', 'PGR042G2994' => 'pgr', 'PGR044G2523' => 'pgr', 'PGR119G0229' => 'pgr', 'PGR119G0407' => 'pgr', 'PGR122G0005' => 'pgr', 'PGR142G3226' => 'pgr', 'PGSC0003DMG400003477' => 'stu', 'PGSC0003DMG400012556' => 'stu', 'PGSC0003DMG400029744' => 'stu', 'PGSC0003DMG400029766' => 'stu', 'PGSC0003DMG400029767' => 'stu', 'PGSC0003DMG400029768' => 'stu', 'PGSC0003DMG400029769' => 'stu', 'PGSC0003DMG400029770' => 'stu', 'PGSC0003DMG401009425' => 'stu', 'PGSC0003DMG402009425' => 'stu', 'Phvul.002G113500' => 'pvu', 'Phvul.002G205000' => 'pvu', 'Phvul.002G205100' => 'pvu', 'Phvul.002G205200' => 'pvu', 'Phvul.002G205300' => 'pvu', 'Phvul.004G096500' => 'pvu', 'Phvul.007G079100' => 'pvu', 'Potri.001G456000' => 'ptr', 'Potri.002G069400' => 'ptr', 'Potri.005G190800' => 'ptr', 'Potri.011G146100' => 'ptr', 'Potri.018G106000' => 'ptr', 'Pp3c11_26180' => 'ppa', 'Pp3c20_1770' => 'ppa', 'Prupe.1G200600' => 'ppe', 'Prupe.1G563300' => 'ppe', 'Prupe.6G329900' => 'ppe', 'Prupe.7G188300' => 'ppe', 'Prupe.8G027700' => 'ppe', 'Psat0s3003g0040' => 'psa', 'Psat1g097040' => 'psa', 'Psat1g097360' => 'psa', 'Psat1g218880' => 'psa', 'Psat6g193360' => 'psa', 'Psat7g096520' => 'psa', 'Psat7g096560' => 'psa', 'Psat7g097040' => 'psa', 'Psat7g097120' => 'psa', 'PSO017G0027' => 'pso', 'PSO017G4341' => 'pso', 'PSO063G5044' => 'pso', 'PSO170G6662' => 'pso', 'PSO173G0131' => 'pso', 'PSO478G1358' => 'pso', 'PSO507G0011' => 'pso', 'PSO782G3966' => 'pso', 'PSO782G4371' => 'pso', 'PSO824G0027' => 'pso', 'PSO832G0879' => 'pso', 'QL02p024088' => 'qlo', 'QL02p097952' => 'qlo', 'QL05p074143' => 'qlo', 'QL11p018551' => 'qlo', 'QL11p018560' => 'qlo', 'QL11p018568' => 'qlo', 'QL11p018643' => 'qlo', 'QL11p018648' => 'qlo', 'QL11p018659' => 'qlo', 'QL11p018693' => 'qlo', 'QL11p052938' => 'qlo', 'RcHm_v2.0_Chr2g0096671' => 'rch', 'RcHm_v2.0_Chr3g0454131' => 'rch', 'RcHm_v2.0_Chr6g0275791' => 'rch', 'RcHm_v2.0_Chr6g0275811' => 'rch', 'Rhsim05G0112700' => 'rsi', 'Rhsim09G0027100' => 'rsi', 'Rhsim11G0133500' => 'rsi', 'Rhsim12G0141400' => 'rsi', 'RhsimUnG0195500' => 'rsi', 'Sabra02G0054400' => 'sbr', 'Sabra05G0145800' => 'sbr', 'Sabra18G0090400' => 'sbr', 'SalBow5G0383' => 'sbo', 'SalBow5G1486' => 'sbo', 'SalBow5G1656' => 'sbo', 'SalBow5G2626' => 'sbo', 'SalBow5G3353' => 'sbo', 'SalBow5G3964' => 'sbo', 'SalBow6G4650' => 'sbo', 'SalBow7G1110' => 'sbo', 'Sc02g0004180' => 'sci', 'Sc08g0002870' => 'sci', 'Sc10g0005140' => 'sci', 'Sed0007411' => 'sed', 'Sed0007933' => 'sed', 'Sed0011394' => 'sed', 'Sed0015302' => 'sed', 'SEGI_05450' => 'sgi', 'SEGI_22846' => 'sgi', 'SEGI_24001' => 'sgi', 'SEGI_25421' => 'sgi', 'SEGI_34911' => 'sgi', 'SGA_v2.0_scaffold332G48936' => 'sas', 'SGA_v2.0_scaffold48G17968' => 'sas', 'SHI06937' => 'shi', 'SMO137G0087' => 'smo', 'SMO137G0128' => 'smo', 'SMO147G0178' => 'smo', 'SMO162G0006' => 'smo', 'SMO365G0020' => 'smo', 'Solyc01g104780.3' => 'sly', 'Solyc01g104800.2' => 'sly', 'Solyc01g104810.2' => 'sly', 'Solyc01g104820.4' => 'sly', 'Solyc01g104830.2' => 'sly', 'Solyc01g105260.1' => 'sly', 'Solyc02g068260.3' => 'sly', 'Solyc04g051180.1' => 'sly', 'Solyc04g150162.1' => 'sly', 'Sopen01g047300' => 'spe', 'Sopen01g047320' => 'spe', 'Sopen01g047330' => 'spe', 'Sopen01g047340' => 'spe', 'Sopen01g047350' => 'spe', 'Sopen01g047760' => 'spe', 'Sopen02g017360' => 'spe', 'Sopen04g022500' => 'spe', 'Sopen04g027120' => 'spe', 'Sp1g18790' => 'spa', 'Sp1g37730' => 'spa', 'Sp3g22810' => 'spa', 'Sp5g31960' => 'spa', 'TAR376G0617' => 'tar', 'TAR381G0299' => 'tar', 'TAR625G0181' => 'tar', 'TAR628G1584' => 'tar', 'THA.LOC104803353' => 'tha', 'THA.LOC104805046' => 'tha', 'THA.LOC104813714' => 'tha', 'Thecc.02G044100' => 'tca', 'Thecc.02G044200' => 'tca', 'Thecc.02G144200' => 'tca', 'Thecc.06G014700' => 'tca', 'Thecc.08G149600' => 'tca', 'Thhalv10002660m.g' => 'esa', 'Thhalv10008583m.g' => 'esa', 'Thhalv10019177m.g' => 'esa', 'TPR.G19724' => 'tpr', 'TPR.G23782' => 'tpr', 'TPR.G23819' => 'tpr', 'TPR.G23825' => 'tpr', 'TPR.G23826' => 'tpr', 'TPR.G23829' => 'tpr', 'TPR.G23840' => 'tpr', 'TPR.G30008' => 'tpr', 'TPR.G36624' => 'tpr', 'TWI31G1148' => 'twi', 'TWI32G0555' => 'twi', 'TWI34G1163' => 'twi', 'TWI60G0131' => 'twi', 'TWI79G0877' => 'twi', 'unitig_26.g9006' => 'ugi', 'unitig_749.g14113' => 'ugi', 'vmacro22912' => 'vma', 'vmacro22913' => 'vma', 'VMungo0251G0217' => 'vmu', 'VMungo0251G1833' => 'vmu', 'VMungo0251G1904' => 'vmu', 'VMungo0251G3736' => 'vmu', 'VMungo0464G1404' => 'vmu', 'VMungo0720G2885' => 'vmu', 'VMungo1215G0022' => 'vmu', 'Zm00001eb075400' => 'zma', 'Zm00001eb076070' => 'zma', 'Zm00001eb248740' => 'zma', 'Zm00001eb427520' => 'zma', 'Zm00001eb434310' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000981' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000981' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000981' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000981' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151