Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000946', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000946' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000946' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000946' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000946' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000946', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000946' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000946' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000946' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000946' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000946', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000946' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000946' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000946' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000946' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D000946', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000946' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D000946', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '633', 'num_species' => '99' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' ) ), 'genes' => array( 'A03p21070' => 'bna', 'A04p20540' => 'bna', 'A04p20550' => 'bna', 'A04p29250' => 'bna', 'A05p38090' => 'bna', 'A06p29700' => 'bna', 'Aa31LG11G700' => 'aar', 'Aa31LG3G4510' => 'aar', 'Aa31LG5G23730' => 'aar', 'Aa31LG9G7090' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.1457' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.599' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1620' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2760' => 'aag', 'Actinidia00947' => 'ach', 'Actinidia05677' => 'ach', 'Actinidia11587' => 'ach', 'Actinidia13935' => 'ach', 'Actinidia19326' => 'ach', 'Actinidia23656' => 'ach', 'Actinidia33072' => 'ach', 'Ah.14g084310' => 'amhyb', 'AL3G22730' => 'aly', 'AL4G35200' => 'aly', 'AL8G12620' => 'aly', 'AL8G39950' => 'aly', 'Aqoxy1G02189' => 'aox', 'Aqoxy3G01056' => 'aox', 'Aqoxy4G02576' => 'aox', 'Aqoxy4G02577' => 'aox', 'Aqoxy7G01121' => 'aox', 'Aqoxy7G01122' => 'aox', 'arahy.Tifrunner.gnm1.ann1.44UVG6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4PRS5N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6B6D15' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6WS8RX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AT5URR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.F01NFC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H7SKKF' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I3R247' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TC58CR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TD3QIE' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.ULB97Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.UQNU32' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W583MK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W72MTM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XEZX8F' => 'arhy', 'AT2G38180' => 'ath', 'AT3G11210' => 'ath', 'AT5G45920' => 'ath', 'AT5G62930' => 'ath', 'ATR0602G284' => 'atr', 'ATR0618G295' => 'atr', 'ATR1091G037' => 'atr', 'ATR1091G038' => 'atr', 'Atru.chr10.1715' => 'acertr', 'Atru.chr12.27' => 'acertr', 'Atru.chr9.2487' => 'acertr', 'AUR62008200' => 'cqu', 'AUR62012244' => 'cqu', 'AUR62022875' => 'cqu', 'AUR62030953' => 'cqu', 'AUR62031142' => 'cqu', 'AUR62036552' => 'cqu', 'BcaB01g03725' => 'bca', 'BcaB01g03726' => 'bca', 'BcaB02g09706' => 'bca', 'BcaB04g21143' => 'bca', 'BcaB06g25639' => 'bca', 'BcaB06g28108' => 'bca', 'BcaB06g29036' => 'bca', 'BcaC01g02540' => 'bca', 'BcaC01g05564' => 'bca', 'BcaC01g05565' => 'bca', 'BcaC02g07488' => 'bca', 'BcaC02g08287' => 'bca', 'BcaC05g29389' => 'bca', 'BcaC09g48160' => 'bca', 'BolC1t05328H' => 'bol', 'BolC3t14878H' => 'bol', 'BolC3t14880H' => 'bol', 'BolC3t18632H' => 'bol', 'BolC4t27158H' => 'bol', 'BolC4t27159H' => 'bol', 'BolC4t28152H' => 'bol', 'BolC5t34352H' => 'bol', 'BraA01t04194Z' => 'bra', 'BraA03t11346Z' => 'bra', 'BraA03t11348Z' => 'bra', 'BraA04t17630Z' => 'bra', 'BraA05t22601Z' => 'bra', 'BraA06t25917Z' => 'bra', 'C03p63770' => 'bna', 'C04p56310' => 'bna', 'C04p66480' => 'bna', 'C04p66510' => 'bna', 'C05p56880' => 'bna', 'CAN.G1055.5' => 'can', 'CAN.G1055.7' => 'can', 'CAN.G1055.8' => 'can', 'CAN.G1069.1' => 'can', 'CAN.G1069.2' => 'can', 'CAN.G2100.1' => 'can', 'CAN.G413.21' => 'can', 'CAN.G5.13' => 'can', 'CAN.G574.21' => 'can', 'CAN.G616.4' => 'can', 'CAN.G616.5' => 'can', 'CAN.G628.84' => 'can', 'CAN.G628.87' => 'can', 'CAN.G628.88' => 'can', 'CAN.G79.57' => 'can', 'CAN.G835.1' => 'can', 'CAN.G835.2' => 'can', 'CAN.G841.26' => 'can', 'CANSAT35G1176' => 'cansat', 'CANSAT35G1998' => 'cansat', 'CANSAT56G1740' => 'cansat', 'CANSAT80G0482' => 'cansat', 'CARHR037640' => 'chi', 'CARHR085770' => 'chi', 'CARHR132780' => 'chi', 'CARHR176020' => 'chi', 'CARHR185480' => 'chi', 'CARHR276740' => 'chi', 'Carub.0003s1052' => 'cru', 'Carub.0004s2016' => 'cru', 'Carub.0008s0201' => 'cru', 'Carub.0008s2364' => 'cru', 'Ca_00418_v3' => 'car', 'Ca_07642_v3' => 'car', 'Ca_07644_v3' => 'car', 'Ca_07645_v3' => 'car', 'Ca_07647_v3' => 'car', 'Ca_07651_v3' => 'car', 'Ca_07652_v3' => 'car', 'Ca_07653_v3' => 'car', 'Ca_15123_v3' => 'car', 'Ca_20233_v3' => 'car', 'CBR_g3742' => 'cbr', 'CBR_g40813' => 'cbr', 'CBR_g72774' => 'cbr', 'Cc02_g06580' => 'ccan', 'Cc02_g14450' => 'ccan', 'Cc02_g14460' => 'ccan', 'Cc04_g14220' => 'ccan', 'Cc06_g01370' => 'ccan', 'CDE01G0542' => 'cde', 'CDE04G3119' => 'cde', 'CDE07G0238' => 'cde', 'CDE12G0909' => 'cde', 'Cfa000576' => 'cfa', 'Cfa019143' => 'cfa', 'Cfa019144' => 'cfa', 'Ciclev10012918m.g' => 'ccl', 'Ciclev10016441m.g' => 'ccl', 'Ciclev10021880m.g' => 'ccl', 'Ciclev10032177m.g' => 'ccl', 'CiPaw.01G298100' => 'cil', 'CiPaw.02G192200' => 'cil', 'CiPaw.09G209100' => 'cil', 'CiPaw.10G057100' => 'cil', 'CiPaw.11G025300' => 'cil', 'CiPaw.12G027100' => 'cil', 'ClCG01G023570' => 'cla', 'ClCG07G004140' => 'cla', 'ClCG10G009690' => 'cla', 'ClCG10G022120' => 'cla', 'COL.COLO4_14538' => 'col', 'COL.COLO4_25713' => 'col', 'COL.COLO4_30055' => 'col', 'COL.COLO4_31338' => 'col', 'Cpa.g.sc11.153' => 'cpa', 'Cpa.g.sc19.177' => 'cpa', 'Cpa.g.sc7.39' => 'cpa', 'Cpa.g.sc7.41' => 'cpa', 'Cpa.g.sc76.39' => 'cpa', 'Cpa.g.sc76.40' => 'cpa', 'Cre09.g399050' => 'cre', 'Cre09.g399073' => 'cre', 'CsaV3_3G033800' => 'csa', 'CsaV3_4G001350' => 'csa', 'CsaV3_5G010100' => 'csa', 'CsaV3_6G050710' => 'csa', 'CSS0004153' => 'camsi', 'CSS0010988' => 'camsi', 'CSS0042241' => 'camsi', 'CSS0042715' => 'camsi', 'CSS0045065' => 'camsi', 'CSS0047229' => 'camsi', 'DCAR_004023' => 'dca', 'DCAR_024829' => 'dca', 'DCAR_026142' => 'dca', 'DCAR_028846' => 'dca', 'DCAR_028847' => 'dca', 'Dinv10626' => 'din', 'Dinv17990' => 'din', 'Dinv20644' => 'din', 'Dinv23104' => 'din', 'Dinv38578' => 'din', 'Dinv40651' => 'din', 'Duzib068G0351' => 'dzi', 'Duzib093G2096' => 'dzi', 'Duzib106G1673' => 'dzi', 'Duzib114G0275' => 'dzi', 'Duzib160G0878' => 'dzi', 'Duzib235G0497' => 'dzi', 'ECA233G4184' => 'eca', 'ECA236G3285' => 'eca', 'ECA236G4363' => 'eca', 'ECA247G2370' => 'eca', 'ECA248G0342' => 'eca', 'EL10Ac2g04823' => 'bvu', 'EL10Ac5g10737' => 'bvu', 'EL10Ac8g20489' => 'bvu', 'EL10Ac8g20490' => 'bvu', 'EL10As2g23277' => 'bvu', 'Eucgr.B02812' => 'egr', 'Eucgr.B02813' => 'egr', 'Eucgr.B02816' => 'egr', 'Eucgr.D00536' => 'egr', 'Eucgr.J00215' => 'egr', 'Eucgr.K02836' => 'egr', 'FAN01G1478' => 'fan', 'FAN02G4467' => 'fan', 'FAN03G0446' => 'fan', 'FAN04G1880' => 'fan', 'FAN05G2769' => 'fan', 'FAN06G1509' => 'fan', 'FAN06G4543' => 'fan', 'FAN08G2847' => 'fan', 'FAN09G2621' => 'fan', 'FAN09G4512' => 'fan', 'FAN10G4299' => 'fan', 'FAN11G1525' => 'fan', 'FAN13G2740' => 'fan', 'FAN14G1939' => 'fan', 'FAN14G3120' => 'fan', 'FAN18G4215' => 'fan', 'FAN18G4548' => 'fan', 'FAN21G2666' => 'fan', 'FvH4_3g04000' => 'fve', 'FvH4_3g08070' => 'fve', 'FvH4_5g05410' => 'fve', 'FvH4_6g11460' => 'fve', 'FvH4_6g11470' => 'fve', 'FvH4_7g24410' => 'fve', 'Glyma.01G122000' => 'gma', 'Glyma.03G058000' => 'gma', 'Glyma.05G038400' => 'gma', 'Glyma.07G150000' => 'gma', 'Glyma.07G150200' => 'gma', 'Glyma.07G150300' => 'gma', 'Glyma.07G150400' => 'gma', 'Glyma.11G229500' => 'gma', 'Glyma.13G171300' => 'gma', 'Glyma.13G232200' => 'gma', 'Glyma.15G080500' => 'gma', 'Glyma.16G099200' => 'gma', 'Glyma.17G088700' => 'gma', 'Glyma.18G027800' => 'gma', 'Glyma.18G201100' => 'gma', 'Glyma.18G201200' => 'gma', 'Glyma.18G201300' => 'gma', 'Glyma.18G201400' => 'gma', 'Gohir.A04G090200' => 'ghi', 'Gohir.A06G110800' => 'ghi', 'Gohir.A10G030900' => 'ghi', 'Gohir.A12G274500' => 'ghi', 'Gohir.A13G015400' => 'ghi', 'Gohir.D04G130300' => 'ghi', 'Gohir.D06G134450' => 'ghi', 'Gohir.D12G275200' => 'ghi', 'Gohir.D13G016600' => 'ghi', 'Gorai.008G295700' => 'gra', 'Gorai.010G156200' => 'gra', 'Gorai.011G033300' => 'gra', 'Gorai.012G114000' => 'gra', 'Gorai.013G018300' => 'gra', 'GSVIVG01007732001' => 'vvi', 'GSVIVG01021182001' => 'vvi', 'GSVIVG01032831001' => 'vvi', 'GSVIVG01033960001' => 'vvi', 'HanXRQChr02g0036011' => 'han', 'HanXRQChr02g0036021' => 'han', 'HanXRQChr08g0222071' => 'han', 'HanXRQChr08g0222091' => 'han', 'HanXRQChr08g0222101' => 'han', 'HanXRQChr11g0331541' => 'han', 'HanXRQChr11g0331551' => 'han', 'HanXRQChr11g0344221' => 'han', 'HanXRQChr12g0370491' => 'han', 'HanXRQChr13g0395081' => 'han', 'HanXRQChr14g0446351' => 'han', 'Haze_06270' => 'cav', 'Haze_07509' => 'cav', 'Haze_07510' => 'cav', 'Haze_17222' => 'cav', 'Haze_21002' => 'cav', 'Hma1.2p1_0155F.1_g068370' => 'hma', 'Hma1.2p1_0703F.1_g206450' => 'hma', 'Hma1.2p1_2165F.1_g315830' => 'hma', 'Hma1.2p1_2469F.1_g322720' => 'hma', 'HPP92_000596' => 'vpl', 'HPP92_019256' => 'vpl', 'HPP92_019262' => 'vpl', 'Hund02748' => 'sun', 'Hund13857' => 'sun', 'Hund15937' => 'sun', 'Hund15938' => 'sun', 'Hund15939' => 'sun', 'Hund15940' => 'sun', 'Hund21190' => 'sun', 'Lalb_Chr01g0023071' => 'lal', 'Lalb_Chr01g0023091' => 'lal', 'Lalb_Chr03g0043271' => 'lal', 'Lalb_Chr09g0328001' => 'lal', 'Lalb_Chr11g0074951' => 'lal', 'Lalb_Chr13g0297761' => 'lal', 'Lalb_Chr20g0121331' => 'lal', 'Lalb_Chr23g0276901' => 'lal', 'Lj1A1196G37' => 'lonja', 'Lj1g0010649' => 'lja', 'Lj1g0020147' => 'lja', 'Lj2A75T38' => 'lonja', 'Lj3g0009271' => 'lja', 'Lj4g0024004' => 'lja', 'Lj4g0024315' => 'lja', 'Lj5A125G62' => 'lonja', 'Lj5C839T0' => 'lonja', 'Lj6g0023533' => 'lja', 'Lj6g0023724' => 'lja', 'Lj8A67G37' => 'lonja', 'Lj9C447G6' => 'lonja', 'Lsat_1_v5_gn_1_119100' => 'lsa', 'Lsat_1_v5_gn_1_27120' => 'lsa', 'Lsat_1_v5_gn_8_101740' => 'lsa', 'Lsat_1_v5_gn_8_101760' => 'lsa', 'Lsat_1_v5_gn_8_102081' => 'lsa', 'Lsat_1_v5_gn_8_102101' => 'lsa', 'Lsat_1_v5_gn_8_12261' => 'lsa', 'Manes.06G105700' => 'mes', 'Manes.07G129000' => 'mes', 'Manes.08G092200' => 'mes', 'Manes.09G104700' => 'mes', 'Manes.10G013200' => 'mes', 'Manes.16G036100' => 'mes', 'Mapoly0010s0099' => 'mpo', 'Mapoly0092s0007' => 'mpo', 'Mapoly0125s0048' => 'mpo', 'Mapoly0125s0049' => 'mpo', 'MBI05_g05307_MAGBIO' => 'mbi', 'MBI06_g18015_MAGBIO' => 'mbi', 'MBI06_g31405_MAGBIO' => 'mbi', 'MBI06_g46560_MAGBIO' => 'mbi', 'MBI16_g05469_MAGBIO' => 'mbi', 'MBI16_g30837_MAGBIO' => 'mbi', 'MCO01G141' => 'mco', 'MD01G1152500' => 'mdo', 'MD04G1152200' => 'mdo', 'MD04G1152300' => 'mdo', 'MD04G1152600' => 'mdo', 'MD05G1304500' => 'mdo', 'MD06G1173000' => 'mdo', 'MD07G1221500' => 'mdo', 'MD07G1221600' => 'mdo', 'MD14G1179100' => 'mdo', 'Medtr2g015480' => 'mtr', 'Medtr2g015500' => 'mtr', 'Medtr2g015510' => 'mtr', 'Medtr3g070460' => 'mtr', 'Medtr4g016500' => 'mtr', 'Medtr4g016510' => 'mtr', 'Medtr4g105680' => 'mtr', 'Medtr7g068450' => 'mtr', 'Medtr7g068460' => 'mtr', 'Medtr7g068470' => 'mtr', 'Medtr7g068500' => 'mtr', 'Medtr7g068520' => 'mtr', 'Medtr7g068530' => 'mtr', 'Medtr7g068550' => 'mtr', 'MELO3C007228.2' => 'cme', 'MELO3C009169.2' => 'cme', 'MELO3C017905.2' => 'cme', 'MELO3C025190.2' => 'cme', 'MELO3C034342.2' => 'cme', 'Migut.F00679' => 'egut', 'Migut.J00171' => 'egut', 'Migut.J00172' => 'egut', 'Migut.J00173' => 'egut', 'Migut.M01064' => 'egut', 'Migut.O00092' => 'egut', 'MSTRG.11463' => 'ama', 'MSTRG.19010' => 'ama', 'MSTRG.205' => 'ama', 'MSTRG.5575' => 'ama', 'MSTRG.5576' => 'ama', 'MSTRG.7389' => 'ama', 'MSTRG.8953' => 'ama', 'Nitab4.5_0000003g0670' => 'nta', 'Nitab4.5_0000202g0020' => 'nta', 'Nitab4.5_0000335g0060' => 'nta', 'Nitab4.5_0000376g0200' => 'nta', 'Nitab4.5_0000511g0040' => 'nta', 'Nitab4.5_0000770g0110' => 'nta', 'Nitab4.5_0000958g0070' => 'nta', 'Nitab4.5_0001171g0060' => 'nta', 'Nitab4.5_0001645g0010' => 'nta', 'Nitab4.5_0002896g0010' => 'nta', 'Nitab4.5_0003024g0020' => 'nta', 'Nitab4.5_0005100g0100' => 'nta', 'Nn1g04345' => 'nnu', 'Nn1g09044' => 'nnu', 'Nn2g11496' => 'nnu', 'Nn3g16832' => 'nnu', 'Nn4g22730' => 'nnu', 'Oeu005171.1' => 'oeu', 'Oeu012066.1' => 'oeu', 'Oeu012067.1' => 'oeu', 'Oeu020588.1' => 'oeu', 'Oeu023433.1' => 'oeu', 'Oeu024697.2' => 'oeu', 'Oeu025639.1' => 'oeu', 'Oeu041305.1' => 'oeu', 'Oeu045105.1' => 'oeu', 'Os01g0214200' => 'osa', 'Os01g0543400' => 'osa', 'Os04g0269700' => 'osa', 'Os06g0156400' => 'osa', 'Os09g0121900' => 'osa', 'Os10g0476700' => 'osa', 'Os11g0708400' => 'osa', 'Peaxi162Scf00009g01717' => 'pax', 'Peaxi162Scf00141g01023' => 'pax', 'Peaxi162Scf00689g00130' => 'pax', 'Peaxi162Scf00706g00121' => 'pax', 'Peaxi162Scf00825g00225' => 'pax', 'PGR004G2798' => 'pgr', 'PGR031G2085' => 'pgr', 'PGR044G0655' => 'pgr', 'PGR044G0791' => 'pgr', 'PGR044G1305' => 'pgr', 'PGSC0003DMG400011021' => 'stu', 'PGSC0003DMG400019180' => 'stu', 'PGSC0003DMG400022963' => 'stu', 'PGSC0003DMG400023074' => 'stu', 'PGSC0003DMG400023822' => 'stu', 'PGSC0003DMG400027087' => 'stu', 'Phvul.001G242700' => 'pvu', 'Phvul.003G201200' => 'pvu', 'Phvul.006G178200' => 'pvu', 'Phvul.008G103600' => 'pvu', 'Phvul.008G103700' => 'pvu', 'Phvul.008G104100' => 'pvu', 'Phvul.008G109001' => 'pvu', 'Phvul.010G001100' => 'pvu', 'Potri.004G053800' => 'ptr', 'Potri.006G100300' => 'ptr', 'Potri.008G068000' => 'ptr', 'Potri.010G189300' => 'ptr', 'Potri.011G063800' => 'ptr', 'Potri.012G081900' => 'ptr', 'Potri.016G115800' => 'ptr', 'Potri.016G115900' => 'ptr', 'Potri.016G116000' => 'ptr', 'Potri.016G116100' => 'ptr', 'Pp3c9_7380' => 'ppa', 'PRCOL_00000137' => 'pco', 'Prupe.2G057300' => 'ppe', 'Prupe.2G249500' => 'ppe', 'Prupe.3G123500' => 'ppe', 'Prupe.4G058000' => 'ppe', 'Prupe.5G172500' => 'ppe', 'Prupe.6G277200' => 'ppe', 'Psat1g199800' => 'psa', 'Psat3g128080' => 'psa', 'Psat3g128160' => 'psa', 'Psat4g057440' => 'psa', 'Psat4g057480' => 'psa', 'Psat4g057520' => 'psa', 'Psat5g128600' => 'psa', 'Psat7g195120' => 'psa', 'Psat7g244920' => 'psa', 'PSO017G5927' => 'pso', 'PSO170G0539' => 'pso', 'PSO170G2313' => 'pso', 'PSO210G7444' => 'pso', 'PSO339G0084' => 'pso', 'PSO339G2994' => 'pso', 'PSO384G0311' => 'pso', 'PSO384G3275' => 'pso', 'PSO478G1695' => 'pso', 'PSO541G1564' => 'pso', 'PSO675G4746' => 'pso', 'QL03p009034' => 'qlo', 'QL03p009061' => 'qlo', 'QL05p044749' => 'qlo', 'QL05p044755' => 'qlo', 'QL07p019731' => 'qlo', 'QL07p019748' => 'qlo', 'QL07p035661' => 'qlo', 'QL07p035676' => 'qlo', 'QL07p035692' => 'qlo', 'QL08p063134' => 'qlo', 'QL10p010319' => 'qlo', 'QL10p011423' => 'qlo', 'RcHm_v2.0_Chr1g0370111' => 'rch', 'RcHm_v2.0_Chr3g0463151' => 'rch', 'RcHm_v2.0_Chr3g0463161' => 'rch', 'RcHm_v2.0_Chr4g0412941' => 'rch', 'RcHm_v2.0_Chr5g0010151' => 'rch', 'RcHm_v2.0_Chr7g0193421' => 'rch', 'Rhsim02G0140600' => 'rsi', 'Rhsim05G0214900' => 'rsi', 'Rhsim08G0173300' => 'rsi', 'Rhsim09G0177000' => 'rsi', 'Rhsim13G0185300' => 'rsi', 'Sabra04G0035200' => 'sbr', 'Sabra06G0077100' => 'sbr', 'Sabra08G0049900' => 'sbr', 'Sabra10G0146000' => 'sbr', 'Sabra11G0045600' => 'sbr', 'Sabra12G0058600' => 'sbr', 'Sabra16G0111600' => 'sbr', 'SalBow1G5997' => 'sbo', 'SalBow4G3304' => 'sbo', 'SalBow5G2831' => 'sbo', 'SalBow5G3407' => 'sbo', 'SalBow5G4475' => 'sbo', 'SalBow5G5720' => 'sbo', 'SalBow8G0903' => 'sbo', 'SalBow8G2894' => 'sbo', 'Sc01g0006460' => 'sci', 'Sc10g0002340' => 'sci', 'Sc10g0010100' => 'sci', 'Sc10g0010110' => 'sci', 'Sed0000851' => 'sed', 'Sed0001922' => 'sed', 'Sed0005363' => 'sed', 'Sed0006686' => 'sed', 'Sed0015484' => 'sed', 'Sed0017209' => 'sed', 'Sed0019899' => 'sed', 'Sed0025488' => 'sed', 'Sed0027214' => 'sed', 'SEGI_05016' => 'sgi', 'SEGI_06413' => 'sgi', 'SEGI_07361' => 'sgi', 'SEGI_15846' => 'sgi', 'SEGI_30513' => 'sgi', 'SEGI_32770' => 'sgi', 'SEGI_38547' => 'sgi', 'SGA_v2.0_scaffold1G00013' => 'sas', 'SGA_v2.0_scaffold1G00014' => 'sas', 'SGA_v2.0_scaffold25G10835' => 'sas', 'SGA_v2.0_scaffold44G16694' => 'sas', 'SGA_v2.0_scaffold75G25018' => 'sas', 'SGA_v2.0_scaffold75G25019' => 'sas', 'SGA_v2.0_scaffold85G26732' => 'sas', 'SGA_v2.0_scaffold85G26734' => 'sas', 'SMO228G0202' => 'smo', 'SMO239G0206' => 'smo', 'Solyc02g077220.3' => 'sly', 'Solyc06g051720.3' => 'sly', 'Solyc06g071510.3' => 'sly', 'Solyc10g076740.3' => 'sly', 'Solyc10g085170.3' => 'sly', 'Sopen02g022110' => 'spe', 'Sopen06g017670' => 'spe', 'Sopen06g027800' => 'spe', 'Sopen10g028370' => 'spe', 'Sopen10g034640' => 'spe', 'Sp2g26070' => 'spa', 'Sp3g09490' => 'spa', 'Sp4g08190' => 'spa', 'Sp4g20500' => 'spa', 'TAR371G0341' => 'tar', 'TAR623G1164' => 'tar', 'TAR627G0057' => 'tar', 'TAR629G3243' => 'tar', 'TAR636G0080' => 'tar', 'THA.LOC104806149' => 'tha', 'THA.LOC104806609' => 'tha', 'THA.LOC104816549' => 'tha', 'THA.LOC104818219' => 'tha', 'Thecc.03G013500' => 'tca', 'Thecc.05G016100' => 'tca', 'Thecc.06G174700' => 'tca', 'Thecc.10G018100' => 'tca', 'Thecc.10G087400' => 'tca', 'Thhalv10004836m.g' => 'esa', 'Thhalv10017306m.g' => 'esa', 'Thhalv10021365m.g' => 'esa', 'TPR.G11642' => 'tpr', 'TPR.G11672' => 'tpr', 'TPR.G11678' => 'tpr', 'TPR.G13332' => 'tpr', 'TPR.G16218' => 'tpr', 'TPR.G36257' => 'tpr', 'TPR.G39546' => 'tpr', 'TPR.G8119' => 'tpr', 'TPR.G8139' => 'tpr', 'TPR.G8145' => 'tpr', 'TPR.G8418' => 'tpr', 'TPR.G8423' => 'tpr', 'TPR.G8425' => 'tpr', 'TWI09G1059' => 'twi', 'TWI39G0252' => 'twi', 'TWI63G1295' => 'twi', 'TWI74G0268' => 'twi', 'TWI74G0570' => 'twi', 'unitig_26.g9090' => 'ugi', 'unitig_699.g19441' => 'ugi', 'unitig_747.g21412' => 'ugi', 'unitig_8.g4451' => 'ugi', 'vmacro10047' => 'vma', 'vmacro15961' => 'vma', 'vmacro19394' => 'vma', 'vmacro20263' => 'vma', 'VMungo0331G1510' => 'vmu', 'VMungo0540G1762' => 'vmu', 'VMungo1215G3042' => 'vmu', 'VMungo1383G0345' => 'vmu', 'VMungo1383G0994' => 'vmu', 'VMungo1383G1824' => 'vmu', 'VMungo1383G2098' => 'vmu', 'VMungo1383G2607' => 'vmu', 'VMungo1383G2862' => 'vmu', 'Zm00001eb065870' => 'zma', 'Zm00001eb087500' => 'zma', 'Zm00001eb119990' => 'zma', 'Zm00001eb271090' => 'zma', 'Zm00001eb433910' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D000946' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000946' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D000946' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D000946' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151