Gene: vmacro17020
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro17020
- Transcript Identifier vmacro17020-RA
- Gene Type Coding gene
- Location chr4_Vaccinium_macrocarpon_Stevens_v1 : 908959-914497 : negative
Gene Family Information
- ID HOM05D001613
- #Genes/#Species 400/97
- Phylogenetic origin
- ID ORTHO05D001556
- #Genes/#Species 390/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro17020_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to SHH1: Protein SAWADEE HOMEODOMAIN HOMOLOG 1 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT1G15215 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | AT1G15215 |
| GO:0006346 | ISO | PLAZA Integrative Orthology | DNA methylation-dependent heterochromatin assembly | AT1G15215 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003682 | IEA | InterPro | chromatin binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.7 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.RNA polymerase-IV-positioning factor (SHH) |