Gene: vmacro12285
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro12285
- Transcript Identifier vmacro12285-RA
- Gene Type Coding gene
- Location chr11_Vaccinium_macrocarpon_Stevens_v1 : 11511214-11515528 : negative
Gene Family Information
- ID HOM05D001301
- #Genes/#Species 483/96
- Phylogenetic origin
- ID ORTHO05D001169
- #Genes/#Species 469/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro12285_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to At2g20760: Clathrin light chain 1 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0072583 | ISO | PLAZA Integrative Orthology | clathrin-dependent endocytosis | AT2G20760 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G20760 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G20760 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000996 | Clathrin light chain |
| Mapman id | Description |
|---|---|
| 22.3.1.1.2 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.light chain |