Gene: vmacro06863

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro06863
  • Transcript Identifier vmacro06863-RA
  • Gene Type Coding gene
  • Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 13266232-13267287 : positive

Gene Family Information

  • ID HOM05D002348
  • #Genes/#Species 289/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro06863_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to FSD2: Superoxide dismutase 2, chloroplastic (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009642
ISO
PLAZA Integrative Orthologyresponse to light intensity AT4G25100
GO:0019430
ISO
PLAZA Integrative Orthologyremoval of superoxide radicals AT4G25100
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G25100
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G25100
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G25100
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G51100
GO:0046688
ISO
PLAZA Integrative Orthologyresponse to copper ion AT4G25100
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT4G25100
GO:0006801
IEA
InterProsuperoxide metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G51100
GO:0004784
IEA
InterProsuperoxide dismutase activity
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G25100
GO:0046872
IEA
InterPrometal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G25100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G25100
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G51100
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G51100
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G25100
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT5G51100
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G25100
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G25100

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily
IPR001189 Manganese/iron superoxide dismutase
IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily
IPR019832 Manganese/iron superoxide dismutase, C-terminal
Mapman id Description
35.1 not assigned.annotated