Gene: vmacro06319
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro06319
- Transcript Identifier vmacro06319-RA
- Gene Type Coding gene
- Location chr2_Vaccinium_macrocarpon_Stevens_v1 : 4819744-4822255 : positive
Gene Family Information
- ID HOM05D001787
- #Genes/#Species 365/99
- Phylogenetic origin
- ID ORTHO05D003488
- #Genes/#Species 221/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id vmacro06319_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to NLP3: Omega-amidase, chloroplastic (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006807 | IEA | InterPro | nitrogen compound metabolic process | |
| GO:0006107 | ISO | PLAZA Integrative Orthology | oxaloacetate metabolic process | AT5G12040 |
| GO:0006108 | ISO | PLAZA Integrative Orthology | malate metabolic process | AT5G12040 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT5G12040 |
| GO:0050152 | ISO | PLAZA Integrative Orthology | omega-amidase activity | AT5G12040 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT5G12040 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G12040 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G12040 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 4.1.2.1.4 | Amino acid metabolism.biosynthesis.aspartate family.asparagine.omega-amidase |