Gene: vmacro04775

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro04775
Transcript Identifier vmacro04775-RA
Gene Type Coding gene
Location chr12_Vaccinium_macrocarpon_Stevens_v1 : 7274002-7278086 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000382
#Genes/#Species 1280/97
Phylogenetic origin

ID ORTHO05D000391
#Genes/#Species 1009/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id vmacro04775_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to TGA1: Transcription factor TGA1 (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006351	IEA	InterPro	transcription, DNA-templated
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0009862	ISO	PLAZA Integrative Orthology	systemic acquired resistance, salicylic acid mediated signaling pathway	AT1G22070
GO:0042742	ISO	PLAZA Integrative Orthology	defense response to bacterium	AT1G22070

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0003677	ISO	PLAZA Integrative Orthology	DNA binding	AT1G22070
GO:0005516	ISO	PLAZA Integrative Orthology	calmodulin binding	AT1G22070
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G22070
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G22070

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G22070

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR025422	Transcription factor TGA like domain
IPR004827	Basic-leucine zipper domain

Mapman id	Description
15.5.4.4.1	RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.TGA transcription factor activity.transcription factor (TGA)