Gene: vmacro04277

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro04277
  • Transcript Identifier vmacro04277-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 38019952-38021248 : positive

Gene Family Information

  • ID HOM05D000082
  • #Genes/#Species 3688/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro04277_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to SIRP1: E3 ubiquitin-protein ligase SIRP1 (Oryza sativa subsp. japonica OX=39947)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0098542
ISO
PLAZA Integrative Orthologydefense response to other organism AT1G14200
GO:0071629
ISO
PLAZA Integrative Orthologycytoplasm protein quality control by the ubiquitin-proteasome system AT1G26800
GO:0000209
ISO
PLAZA Integrative Orthologyprotein polyubiquitination AT1G26800
GO:0010200
ISO
PLAZA Integrative Orthologyresponse to chitin AT4G26400
GO:0061635
ISO
PLAZA Integrative Orthologyregulation of protein complex stability AT1G26800
GO:0051865
ISO
PLAZA Integrative Orthologyprotein autoubiquitination AT1G26800
GO:0071218
ISO
PLAZA Integrative Orthologycellular response to misfolded protein AT1G26800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061630
IEA
InterProubiquitin protein ligase activity
GO:0051787
ISO
PLAZA Integrative Orthologymisfolded protein binding AT1G26800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G26800
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G26800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001841 Zinc finger, RING-type
IPR039525 E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
19.2.2.1.4.3.3.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.BTL-subclass ligase