Gene: unitig_0.g2401
General Information
Structural Information
- Species Utricularia gibba
- Gene Identifier unitig_0.g2401
- Transcript Identifier unitig_0.g2401.t1
- Gene Type Coding gene
- Location unitig_0 : 7253226-7259717 : negative
Gene Family Information
- ID HOM05D002300
- #Genes/#Species 294/98
- Phylogenetic origin
- ID ORTHO05D002340
- #Genes/#Species 296/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid unitig_0.g2401.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006352 | IEA | InterPro | DNA-templated transcription, initiation | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G43410 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT2G43410 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT2G43410 |
| GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT2G43410 |
| GO:0031048 | ISO | PLAZA Integrative Orthology | heterochromatin assembly by small RNA | AT2G43410 |
| GO:0006378 | ISO | PLAZA Integrative Orthology | mRNA polyadenylation | AT2G43410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000785 | ISO | PLAZA Integrative Orthology | chromatin | AT2G43410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007630 | RNA polymerase sigma-70 region 4 |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR013324 | RNA polymerase sigma factor, region 3/4-like |
| IPR012921 | Spen paralogue and orthologue SPOC, C-terminal |
| IPR000943 | RNA polymerase sigma-70 |
| Mapman id | Description |
|---|---|
| 15.6.2.1 | RNA biosynthesis.organelle machinery.transcriptional regulation.basal transcription factor (Sigma) |