Gene: Zm00001eb409800

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb409800
  • Transcript Identifier Zm00001eb409800_T001
  • Gene Type Coding gene
  • Location 10 : 20061611-20072116 : negative

Gene Family Information

  • ID HOM05D000329
  • #Genes/#Species 1418/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb409800_T001
  • pid Zm00001eb409800_P001
  • uniprot A0A1D6IVJ9
  • uniprot A0A3L6GB91
  • uniprot A0A1D6PJX3
  • uniprot A0A1D6IVK0
  • V4_identifier Zm00001d023788

Descriptions

  • Description Zm00001e039647
  • Description Lysine-specific demethylase REF6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0034721
IEA
GOA Databasehistone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0016577
IEA
GOA Databasehistone demethylation
GO:0006338
IBA
GOA Databasechromatin remodeling

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0034647
IBA
GOA Databasehistone demethylase activity (H3-trimethyl-K4 specific)
GO:0032452
IBA
GOA Databasehistone demethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR003349 JmjN domain
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
12.3.3.8.6 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (PKDM9)