Gene: Zm00001eb369880
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb369880
- Transcript Identifier Zm00001eb369880_T001
- Gene Type Coding gene
- Location 8 : 178653599-178663476 : positive
Gene Family Information
- ID HOM05D000515
- #Genes/#Species 1048/100
- Phylogenetic origin
- ID ORTHO05D001911
- #Genes/#Species 338/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Zm00001eb369880_T001
- pid Zm00001eb369880_P001
- uniprot A0A1D6GA59
- uniprot A0A1D6GA63
- uniprot A0A1D6GA74
- uniprot A0A1D6GA85
- uniprot A0A1D6GA64
- uniprot A0A1D6GA54
- uniprot A0A1D6GA87
- uniprot A0A1D6GA55
- uniprot A0A1D6GA81
- uniprot A0A1D6GA82
- uniprot A0A1D6GA72
- uniprot A0A1D6GA62
- uniprot A0A1D6GA84
- uniprot A0A3L6DXC5
- uniprot A0A1D6GA80
- entrez 103636595
- refseq XP_008657175.1
- refseq XM_008658953.1
- V4_identifier Zm00001d012624
Descriptions
- Description Zm00001e028953
- Description SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0080188 | ISO | PLAZA Integrative Orthology | gene silencing by RNA-directed DNA methylation | AT3G20010 |
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G61140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G20010 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR001650 | Helicase, C-terminal |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR001841 | Zinc finger, RING-type |
| IPR000330 | SNF2, N-terminal |
| Mapman id | Description |
|---|---|
| 12.4.8.3.3 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Ris1) |