Gene: Zm00001eb322510

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb322510
  • Transcript Identifier Zm00001eb322510_T001
  • Gene Type Coding gene
  • Location 7 : 161584908-161591190 : positive

Gene Family Information

  • ID HOM05D000515
  • #Genes/#Species 1048/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb322510_T001
  • pid Zm00001eb322510_P001
  • uniprot A0A1D6G3K8
  • uniprot A0A3L6DFC2
  • uniprot A0A1D6ICP3
  • uniprot A0A1D6ICP4
  • uniprot A0A1D6KUA1
  • uniprot A0A3L6F750
  • uniprot A0A3L6FYJ1
  • uniprot A0A3L6E1J7
  • uniprot A0A3L6ERN8
  • entrez 103633219
  • refseq XP_008653136.1
  • refseq XM_008654914.1
  • V4_identifier Zm00001d021607

Descriptions

  • Description Zm00001e035086
  • Description Helicase protein with RING/U-box domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc05g044480.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc05g044480.3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018957 Zinc finger, C3HC4 RING-type
IPR001650 Helicase, C-terminal
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR038718 SNF2-like, N-terminal domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000330 SNF2, N-terminal
IPR001841 Zinc finger, RING-type
IPR014001 Helicase superfamily 1/2, ATP-binding domain
Mapman id Description
12.4.8.3.2 Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)