Gene: Zm00001eb277640

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb277640
  • Transcript Identifier Zm00001eb277640_T001
  • Gene Type Coding gene
  • Location 6 : 115594139-115596102 : positive

Gene Family Information

  • ID HOM05D004058
  • #Genes/#Species 173/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb277640_T001
  • pid Zm00001eb277640_P001
  • uniprot A0A1D6LT60
  • V4_identifier Zm00001d036997

Descriptions

  • Description Zm00001e148377
  • Description Exosome complex component RRP45B
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010025
ISO
PLAZA Integrative Orthologywax biosynthetic process AT3G12990
GO:0000467
IBA
GOA Databaseexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0034476
IBA
GOA DatabaseU5 snRNA 3'-end processing
GO:0034475
IBA
GOA DatabaseU4 snRNA 3'-end processing
GO:0034473
IBA
GOA DatabaseU1 snRNA 3'-end processing
GO:0034427
IBA
GOA Databasenuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0016075
IBA
GOA DatabaserRNA catabolic process
GO:0043928
IBA
GOA Databaseexonucleolytic catabolism of deadenylated mRNA
GO:0071042
IBA
GOA Databasenuclear polyadenylation-dependent mRNA catabolic process
GO:0071038
IBA
GOA Databasenuclear polyadenylation-dependent tRNA catabolic process
GO:0071035
IBA
GOA Databasenuclear polyadenylation-dependent rRNA catabolic process
GO:0071028
IBA
GOA Databasenuclear mRNA surveillance
GO:0006396
IEA
GOA DatabaseRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000175
ISO
PLAZA Integrative Orthology3'-5'-exoribonuclease activity AT3G12990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000177
IBA
GOA Databasecytoplasmic exosome (RNase complex)
GO:0000176
IBA
GOA Databasenuclear exosome (RNase complex)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0000178
IEA
GOA Databaseexosome (RNase complex)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001247 Exoribonuclease, phosphorolytic domain 1
IPR027408 PNPase/RNase PH domain superfamily
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR015847 Exoribonuclease, phosphorolytic domain 2
Mapman id Description
16.4.1.1.5 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP45