Gene: Zm00001eb216020

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb216020
  • Transcript Identifier Zm00001eb216020_T001
  • Gene Type Coding gene
  • Location 5 : 10596347-10598843 : negative

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb216020_T001
  • pid Zm00001eb216020_P001
  • uniprot A0A317YIW1
  • uniprot Q53ZT7
  • uniprot A0A3L6EUH5
  • uniprot A0A1D6GIV7
  • uniprot P19862
  • uniprot A0A1D6GIV4
  • V4_identifier Zm00001d013402

Descriptions

  • Description Zm00001e012154
  • Description Phytochrome
  • Description phytochromeA2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010201
ISO
PLAZA Integrative Orthologyresponse to continuous far red light stimulus by the high-irradiance response system AT1G09570
GO:0017148
ISO
PLAZA Integrative Orthologynegative regulation of translation AT1G09570
GO:0010203
ISO
PLAZA Integrative Orthologyresponse to very low fluence red light stimulus AT1G09570
GO:0046685
ISO
PLAZA Integrative Orthologyresponse to arsenic-containing substance AT1G09570
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT1G09570
GO:0009638
ISO
PLAZA Integrative Orthologyphototropism AT1G09570
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G09570
GO:0010161
ISO
PLAZA Integrative Orthologyred light signaling pathway AT1G09570
GO:0009640
ISO
PLAZA Integrative Orthologyphotomorphogenesis AT1G09570
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage
GO:0018298
IEA
InterProprotein-chromophore linkage
GO:0009584
IEA
GOA Databasedetection of visible light
GO:0009584
IEA
InterProdetection of visible light
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0017006
IEA
GOA Databaseprotein-tetrapyrrole linkage
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0007165
IEA
GOA Databasesignal transduction
GO:0000160
IEA
GOA Databasephosphorelay signal transduction system
GO:0050896
IEA
GOA Databaseresponse to stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G09570
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G09570
GO:0031516
ISO
PLAZA Integrative Orthologyfar-red light photoreceptor activity AT1G09570
GO:0009883
ISO
PLAZA Integrative Orthologyred or far-red light photoreceptor activity AT1G09570
GO:0004672
ISO
PLAZA Integrative Orthologyprotein kinase activity AT1G09570
GO:0009881
IEA
GOA Databasephotoreceptor activity
GO:0005515
IEA
InterProprotein binding
GO:0000155
IEA
GOA Databasephosphorelay sensor kinase activity
GO:0042803
IEA
GOA Databaseprotein homodimerization activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G09570
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT1G09570
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043150 Phytochrome, PHY domain
IPR035965 PAS domain superfamily
IPR003018 GAF domain
IPR013515 Phytochrome, central region
IPR013654 PAS fold-2
IPR000014 PAS domain
IPR013767 PAS fold
IPR029016 GAF-like domain superfamily
IPR001294 Phytochrome
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)