Gene: Zm00001eb187620
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb187620
- Transcript Identifier Zm00001eb187620_T001
- Gene Type Coding gene
- Location 4 : 162269644-162270204 : positive
Gene Family Information
- ID HOM05D000440
- #Genes/#Species 1177/93
- Phylogenetic origin
- ID ORTHO05D000295
- #Genes/#Species 1168/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb187620_T001
- pid Zm00001eb187620_P001
- uniprot B4FPP9
- uniprot A0A3L6F0R1
- entrez 100280990
- refseq NM_001153910.1
- refseq NP_001147382.1
- V4_identifier Zm00001d051501
Descriptions
- Description Zm00001e023260
- Description Putative RING zinc finger domain superfamily protein
- Description RING-H2 finger protein ATL80
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016567 | IEA | GOA Database | protein ubiquitination | |
| GO:0006511 | IBA | GOA Database | ubiquitin-dependent protein catabolic process | |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT1G20823 |
| GO:0010966 | ISO | PLAZA Integrative Orthology | regulation of phosphate transport | AT1G20823 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT4G35480 |
| GO:0006513 | ISO | PLAZA Integrative Orthology | protein monoubiquitination | AT2G17450 |
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT1G20823 |
| GO:0051865 | ISO | PLAZA Integrative Orthology | protein autoubiquitination | AT2G17450 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061630 | IBA | GOA Database | ubiquitin protein ligase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G17450 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G20823 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.3.3.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ATL-subclass ligase |