Gene: Zm00001eb179660

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb179660
  • Transcript Identifier Zm00001eb179660_T001
  • Gene Type Coding gene
  • Location 4 : 86232883-86237236 : positive

Gene Family Information

  • ID HOM05D000974
  • #Genes/#Species 616/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb179660_T001
  • pid Zm00001eb179660_P001
  • uniprot A0A1D6Q1I9
  • uniprot A0A3L6F942
  • uniprot K7TZY3
  • uniprot A0A1D6Q1I4
  • uniprot A0A1D6Q1I5
  • uniprot A0A1D6Q1I6
  • entrez 103653473
  • refseq XP_008678587.1
  • refseq XP_008678588.1
  • refseq XM_008680366.1
  • refseq XM_008680365.1
  • V4_identifier Zm00001d050401

Descriptions

  • Description Zm00001e022452
  • Description Polypyrimidine tract-binding protein homolog 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
IBA
GOA Databaseregulation of RNA splicing
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT3G01150
GO:0000381
ISO
PLAZA Integrative Orthologyregulation of alternative mRNA splicing, via spliceosome AT3G01150
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT3G01150
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT3G01150

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G01150
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT3G01150

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR034792 PTBPH1/PTBPH2, RNA recognition motif 1
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.2.6.7 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (PTB)