Gene: Zm00001eb159620

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb159620
  • Transcript Identifier Zm00001eb159620_T002
  • Gene Type Coding gene
  • Location 3 : 223555222-223559027 : positive

Gene Family Information

  • ID HOM05D000974
  • #Genes/#Species 616/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb159620_T002
  • pid Zm00001eb159620_P002
  • uniprot A0A1D6NJF8
  • uniprot A0A1D6NJG7
  • uniprot A0A1D6NJG6
  • uniprot A0A1D6NJH5
  • uniprot A0A1D6NJH4
  • uniprot A0A1D6NJG1
  • uniprot A0A1D6NJG0
  • uniprot A0A1D6NJH0
  • uniprot A0A3L6FAJ8
  • uniprot A0A1D6NJF9
  • entrez 103651483
  • refseq XM_008677125.1
  • refseq XP_008675347.1
  • V4_identifier Zm00001d044195

Descriptions

  • Description Zm00001e020441
  • Description Polypyrimidine tract-binding protein homolog 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043484
IBA
IEA
GOA Databaseregulation of RNA splicing
GO:0009845
IEA
GOA Databaseseed germination
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0000381
IEA
GOA Databaseregulation of alternative mRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IBA
IEA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0000932
IEA
GOA DatabaseP-body
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034792 PTBPH1/PTBPH2, RNA recognition motif 1
Mapman id Description
35.1 not assigned.annotated