Gene: Thhalv10010282m.g

General Information

Structural Information

  • Species Eutrema salsugineum
  • Gene Identifier Thhalv10010282m.g
  • Transcript Identifier Thhalv10010282m
  • Gene Type Coding gene
  • Location scaffold_16 : 868762-870351 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thhalv10010282m.g.v1.0
  • pacid 20206966

Descriptions

  • Description PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT2G15690

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G15690

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G15690
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G15690

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR032867 DYW domain
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
16.11.3.3.4.18 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DYW2)