Gene: Thecc.09G187500

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.09G187500
  • Transcript Identifier Thecc.09G187500.1
  • Gene Type Coding gene
  • Location Chromosome_9 : 17718549-17721918 : negative

Gene Family Information

  • ID HOM05D002303
  • #Genes/#Species 294/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.09G187500.v2.1
  • pacid 42011054
  • ancestorIdentifier Thecc1EG039496.CGDv1.1
  • ancestorIdentifier Thecc1EG039496t1.CGDv1.1

Descriptions

  • Description Transducin/WD40 repeat-like superfamily protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G10580

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071013
IEA
InterProcatalytic step 2 spliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR032847 Pre-mRNA-processing factor 17
Mapman id Description
16.2.5.2.11 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component Prp17