Gene: Thecc.09G177500

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.09G177500
  • Transcript Identifier Thecc.09G177500.1
  • Gene Type Coding gene
  • Location Chromosome_9 : 15229988-15234851 : negative

Gene Family Information

  • ID HOM05D000854
  • #Genes/#Species 698/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.09G177500.v2.1
  • pacid 42009897
  • ancestorIdentifier Thecc1EG039217.CGDv1.1
  • ancestorIdentifier Thecc1EG039217t1.CGDv1.1

Descriptions

  • Description Small nuclear ribonucleoprotein F
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0000387
IEA
InterProspliceosomal snRNP assembly

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR016487 Sm-like protein Lsm6/SmF
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034100 Small nuclear ribonucleoprotein F
Mapman id Description
16.2.2.6 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-F