Gene: Thecc.07G059600

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.07G059600
  • Transcript Identifier Thecc.07G059600.1
  • Gene Type Coding gene
  • Location Chromosome_7 : 3390553-3393642 : positive

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.07G059600.v2.1
  • pacid 41995343
  • ancestorIdentifier Thecc1EG031183.CGDv1.1
  • ancestorIdentifier Thecc1EG031183t1.CGDv1.1

Descriptions

  • Description RNA-binding family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT5G54580
GO:1900871
ISO
PLAZA Integrative Orthologychloroplast mRNA modification AT1G73530
GO:0016554
ISO
PLAZA Integrative Orthologycytidine to uridine editing AT1G73530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G73530
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G73530

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G73530
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G54580

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
16.11.3.3.2 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.RNA editing factor (ORRM)