Gene: Thecc.06G167200

General Information

Structural Information

Species Theobroma cacao
Gene Identifier Thecc.06G167200
Transcript Identifier Thecc.06G167200.1
Gene Type Coding gene
Location Chromosome_6 : 24155578-24158202 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Thecc.06G167200.v2.1
pacid 42005024
ancestorIdentifier Thecc1EG029664.CGDv1.1
ancestorIdentifier Thecc1EG029664t1.CGDv1.1

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010087	ISO	PLAZA Integrative Orthology	phloem or xylem histogenesis	AT4G18750
GO:0048366	ISO	PLAZA Integrative Orthology	leaf development	AT4G18750
GO:0010588	ISO	PLAZA Integrative Orthology	cotyledon vascular tissue pattern formation	AT4G18750
GO:0010305	ISO	PLAZA Integrative Orthology	leaf vascular tissue pattern formation	AT4G18750
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT4G18750

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT4G18750

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032867	DYW domain
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat

Mapman id	Description
16.11.3.3.4.59	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DOT4)