Gene: Thecc.03G145000

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.03G145000
  • Transcript Identifier Thecc.03G145000.1
  • Gene Type Coding gene
  • Location Chromosome_3 : 25616730-25618949 : positive

Gene Family Information

  • ID HOM05D001364
  • #Genes/#Species 458/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.03G145000.v2.1
  • pacid 41997937
  • ancestorIdentifier Thecc1EG014807.CGDv1.1
  • ancestorIdentifier Thecc1EG014807t1.CGDv1.1

Descriptions

  • Description RNA-binding family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G51120
GO:0008143
ISO
PLAZA Integrative Orthologypoly(A) binding AT5G51120
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G51120
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association AT5G10350

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G10350
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G51120
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G10350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.3.1.1.2 RNA processing.RNA 3'-end processing.mRNA polyadenylation.poly(A) RNA polymerase activity.poly(A) RNA polymerase regulatory protein