Gene: TPR.G9904

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G9904
  • Transcript Identifier TPR.T10239
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_500 : 170233-177179 : negative

Gene Family Information

  • ID HOM05D000250
  • #Genes/#Species 1697/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA10239.v2
  • id Tp57577_TGAC_v2_gene9904.v2
  • pacid 35981623
  • uniprot A0A2K3L293

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009408
IEA
GOA Databaseresponse to heat
GO:0009409
IEA
GOA Databaseresponse to cold
GO:0009737
IEA
GOA Databaseresponse to abscisic acid
GO:0016973
IEA
GOA Databasepoly(A)+ mRNA export from nucleus
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc04g082790.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0008186
IEA
GOA DatabaseATPase, acting on RNA
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc04g082790.4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
IEA
GOA Databasenuclear envelope
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
Mapman id Description
16.10.3.1 RNA processing.messenger ribonucleoparticle (mRNP) export.mRNP remodeling.ATP-dependent helicase (DBP5/LOS4)