Gene: TPR.G8019

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G8019
  • Transcript Identifier TPR.T8292
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_283 : 22446-30371 : positive

Gene Family Information

  • ID HOM05D001027
  • #Genes/#Species 591/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA8292.v2
  • id Tp57577_TGAC_v2_gene8019.v2
  • pacid 35985332

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G49950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003691
IEA
InterProdouble-stranded telomeric DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G49950
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G49950
GO:1990841
ISO
PLAZA Integrative Orthologypromoter-specific chromatin binding AT1G49950
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G49950
GO:0043047
ISO
PLAZA Integrative Orthologysingle-stranded telomeric DNA binding Zm00001eb357490

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G49950
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex AT1G49950
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G49950
GO:0000785
ISO
PLAZA Integrative Orthologychromatin AT1G49950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR044597 Single myb histone 1-6
IPR005818 Linker histone H1/H5, domain H15
IPR001005 SANT/Myb domain
IPR017930 Myb domain
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated