Gene: TPR.G7889
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G7889
- Transcript Identifier TPR.T8161
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG6 : 4662806-4676546 : negative
Gene Family Information
- ID HOM05D000208
- #Genes/#Species 1933/98
- Phylogenetic origin
- ID ORTHO05D000130
- #Genes/#Species 1771/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA8161.v2
- id Tp57577_TGAC_v2_gene7889.v2
- pacid 35974163
- uniprot A0A2K3KUK5
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006334 | IEA | InterPro | nucleosome assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0016702 | IEA | InterPro | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003691 | IEA | GOA Database | double-stranded telomeric DNA binding | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000208 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000786 | IEA | InterPro | nucleosome | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001005 | SANT/Myb domain |
| IPR001246 | Lipoxygenase, plant |
| IPR005818 | Linker histone H1/H5, domain H15 |
| IPR009057 | Homeobox-like domain superfamily |
| IPR036226 | Lipoxigenase, C-terminal domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR013819 | Lipoxygenase, C-terminal |
| IPR017930 | Myb domain |
| IPR000907 | Lipoxygenase |
| Mapman id | Description |
|---|---|
| 50.1.12 | Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase) |