Gene: TPR.G5898
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G5898
- Transcript Identifier TPR.T6101
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG6 : 13513445-13515150 : negative
Gene Family Information
- ID HOM05D000010
- #Genes/#Species 9383/97
- Phylogenetic origin
- ID ORTHO05D000302
- #Genes/#Species 1157/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA6101.v2
- id Tp57577_TGAC_v2_gene5898.v2
- pacid 35974909
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Os11g0127600 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | Os11g0127600 |
| GO:2000014 | ISO | PLAZA Integrative Orthology | regulation of endosperm development | Os01g0104500 |
| GO:1900057 | ISO | PLAZA Integrative Orthology | positive regulation of leaf senescence | AT3G04060 |
| GO:1903648 | ISO | PLAZA Integrative Orthology | positive regulation of chlorophyll catabolic process | AT3G04060 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Os11g0127600 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G04060 |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | Os01g0104500 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G04060 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | Os11g0127600 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | Os01g0104500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.17 | RNA biosynthesis.transcriptional regulation.transcription factor (NAC) |