Gene: TPR.G40339

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G40339
  • Transcript Identifier TPR.T41691
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_1471 : 21827-22042 : positive

Gene Family Information

  • ID HOM05D000890
  • #Genes/#Species 673/80
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA41691.v2
  • id Tp57577_TGAC_v2_gene40339.v2
  • pacid 35986539

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009767
IEA
InterProphotosynthetic electron transport chain
GO:0019684
IEA
InterProphotosynthesis, light reaction
GO:0009772
ISO
PLAZA Homology (enrichment)photosynthetic electron transport in photosystem II HOM05D000890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
IEA
InterProchlorophyll binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00280
GO:0045156
ISO
PLAZA Homology (enrichment)electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity HOM05D000890
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00280

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009521
IEA
InterProphotosystem
GO:0016020
IEA
InterPromembrane
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00280
GO:0009539
ISO
PLAZA Integrative Orthologyphotosystem II reaction center ATCG00280
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00280
GO:0009533
ISO
PLAZA Integrative Orthologychloroplast stromal thylakoid ATCG00280
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00280
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00280
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000932 Photosystem antenna protein-like
IPR036001 Photosystem antenna protein-like superfamily
Mapman id Description
35.1 not assigned.annotated