Gene: TPR.G3950

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G3950
  • Transcript Identifier TPR.T4075
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_28301 : 11-511 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA4075.v2
  • id Tp57577_TGAC_v2_gene3950.v2
  • pacid 35954507
  • uniprot A0A2K3JQI3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042546
ISO
PLAZA Homology (enrichment)cell wall biogenesis HOM05D000066
GO:0010411
ISO
PLAZA Homology (enrichment)xyloglucan metabolic process HOM05D000066
GO:0009834
IEA
GOA Databaseplant-type secondary cell wall biogenesis
GO:0006073
IEA
GOA Databasecellular glucan metabolic process
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016762
IEA
GOA Databasexyloglucan:xyloglucosyl transferase activity
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
IEA
GOA Databaseextracellular region
GO:0005618
IEA
GOA Databasecell wall
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
GOA Databaseapoplast
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000757 Glycoside hydrolase family 16
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 Beta-glucanase/XTH
Mapman id Description
35.1 not assigned.annotated