Gene: TPR.G39343

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G39343
  • Transcript Identifier TPR.T40685
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_5126 : 11-2178 : negative

Gene Family Information

  • ID HOM05D000618
  • #Genes/#Species 925/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA40685.v2
  • id Tp57577_TGAC_v2_gene39343.v2
  • pacid 35969204

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT5G62460
GO:0071470
ISO
PLAZA Integrative Orthologycellular response to osmotic stress AT5G62460
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT1G14260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT1G14260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G47550
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G62460
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G62460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011016 Zinc finger, RING-CH-type
IPR022143 Protein of unknown function DUF3675
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR033275 E3 ubiquitin-protein ligase MARCH-like
Mapman id Description
19.2.2.1.4.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-v-class E3 ligase