Gene: TPR.G39205

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G39205
  • Transcript Identifier TPR.T40541
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG3 : 17667331-17670729 : positive

Gene Family Information

  • ID HOM05D000777
  • #Genes/#Species 759/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA40541.v2
  • id Tp57577_TGAC_v2_gene39205.v2
  • pacid 35990240

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006486
IEA
InterProprotein glycosylation
GO:0010493
ISO
PLAZA Integrative OrthologyLewis a epitope biosynthetic process AT1G26810
GO:0010405
ISO
PLAZA Integrative Orthologyarabinogalactan protein metabolic process AT3G06440
GO:0048354
ISO
PLAZA Integrative Orthologymucilage biosynthetic process involved in seed coat development AT3G06440
GO:0080147
ISO
PLAZA Integrative Orthologyroot hair cell development AT3G06440
GO:0018258
ISO
PLAZA Integrative Orthologyprotein O-linked glycosylation via hydroxyproline AT3G06440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030246
IEA
InterProcarbohydrate binding
GO:0016758
IEA
InterProhexosyltransferase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G26810
GO:1990714
ISO
PLAZA Integrative Orthologyhydroxyproline O-galactosyltransferase activity AT3G06440
GO:0010488
ISO
PLAZA Integrative OrthologyUDP-galactose:N-glycan beta-1,3-galactosyltransferase activity AT1G26810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
InterPromembrane
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G26810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001079 Galectin, carbohydrate recognition domain
IPR002659 Glycosyl transferase, family 31
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Mapman id Description
18.1.1.6.9 Protein modification.glycosylation.N-linked glycosylation.complex N-glycan maturation.beta-1,3-galactosyltransferase