Gene: TPR.G3606

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G3606
Transcript Identifier TPR.T3711
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG7 : 24042268-24048675 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000631
#Genes/#Species 901/98
Phylogenetic origin

ID ORTHO05D000524
#Genes/#Species 814/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA3711.v2
id Tp57577_TGAC_v2_gene3606.v2
pacid 35955403

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009611	ISO	PLAZA Integrative Orthology	response to wounding	AT1G79380
GO:0009867	ISO	PLAZA Integrative Orthology	jasmonic acid mediated signaling pathway	AT1G79380
GO:0042742	ISO	PLAZA Integrative Orthology	defense response to bacterium	AT1G79380

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G79380
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G79380

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G79380
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G79380

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR036465	von Willebrand factor A-like domain superfamily
IPR010734	Copine, C-terminal
IPR002035	von Willebrand factor, type A

Mapman id	Description
19.2.2.1.4.3.2	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-HC-class E3 ligase
19.2.2.1.5.2	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.ligating E3 protein (RGLG)