Gene: TPR.G32371
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G32371
- Transcript Identifier TPR.T33456
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_195 : 225678-232555 : positive
Gene Family Information
- ID HOM05D000515
- #Genes/#Species 1048/100
- Phylogenetic origin
- ID ORTHO05D003188
- #Genes/#Species 239/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA33456.v2
- id Tp57577_TGAC_v2_gene32371.v2
- pacid 35954423
- uniprot A0A2K3PJX1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0036297 | IEA | GOA Database | interstrand cross-link repair | |
| GO:0045003 | IEA | GOA Database | double-strand break repair via synthesis-dependent strand annealing | |
| GO:0009294 | IEA | GOA Database | DNA mediated transformation | |
| GO:0000724 | IEA | GOA Database | double-strand break repair via homologous recombination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0016818 | IEA | InterPro | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | GOA Database | nucleosome-dependent ATPase activity | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity | |
| GO:0004386 | IEA | GOA Database | helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G43530 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014905 | HIRAN domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR000330 | SNF2, N-terminal |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR001841 | Zinc finger, RING-type |
| Mapman id | Description |
|---|---|
| 12.4.8.3.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5) |