Gene: TPR.G31454

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G31454
Transcript Identifier TPR.T32513
Gene Type Coding gene
Location Tp57577_TGAC_v2_scaf_720 : 24009-27474 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000809
#Genes/#Species 730/100
Phylogenetic origin

ID ORTHO05D001196
#Genes/#Species 459/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA32513.v2
id Tp57577_TGAC_v2_gene31454.v2
pacid 35991191
uniprot A0A2K3NDQ2

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045814	ISO	PLAZA Integrative Orthology	negative regulation of gene expression, epigenetic	AT3G24440
GO:0016571	ISO	PLAZA Integrative Orthology	histone methylation	AT3G24440
GO:0051571	ISO	PLAZA Integrative Orthology	positive regulation of histone H3-K4 methylation	AT3G24440
GO:0048575	ISO	PLAZA Integrative Orthology	short-day photoperiodism, flowering	AT3G24440
GO:0061087	ISO	PLAZA Integrative Orthology	positive regulation of histone H3-K27 methylation	AT3G24440
GO:0031062	ISO	PLAZA Integrative Orthology	positive regulation of histone methylation	AT3G24440
GO:0009909	ISO	PLAZA Integrative Orthology	regulation of flower development	AT3G24440
GO:0048572	ISO	PLAZA Integrative Orthology	short-day photoperiodism	AT3G24440
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT3G24440
GO:0010048	IEA	GOA Database	vernalization response
GO:0010048	IEA	InterPro	vernalization response
GO:0040029	IEA	GOA Database	regulation of gene expression, epigenetic
GO:0040029	IEA	InterPro	regulation of gene expression, epigenetic

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005677	ISO	PLAZA Integrative Orthology	chromatin silencing complex	AT3G24440
GO:0016607	ISO	PLAZA Integrative Orthology	nuclear speck	AT3G24440
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003961	Fibronectin type III
IPR044514	Vernalization insensitive 3-like
IPR032881	Oberon, PHD finger domain
IPR013783	Immunoglobulin-like fold
IPR036116	Fibronectin type III superfamily

Mapman id	Description
12.3.3.2.1.2.2	Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting factor (VIN3/VEL)