Gene: TPR.G3054

General Information

Structural Information

Species Trifolium pratense
Gene Identifier TPR.G3054
Transcript Identifier TPR.T3144
Gene Type Coding gene
Location Tp57577_TGAC_v2_LG1 : 21855144-21859098 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000032
#Genes/#Species 5307/100
Phylogenetic origin

ID ORTHO05D004701
#Genes/#Species 173/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Tp57577_TGAC_v2_mRNA3144.v2
id Tp57577_TGAC_v2_gene3054.v2
pacid 35981331
uniprot Q2PEW4

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	GOA Database	nucleic acid binding
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	GOA Database	ATP binding
GO:0005524	IEA	InterPro	ATP binding
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0000166	IEA	GOA Database	nucleotide binding

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001650	Helicase, C-terminal
IPR011545	DEAD/DEAH box helicase domain
IPR001878	Zinc finger, CCHC-type
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR036875	Zinc finger, CCHC-type superfamily

Mapman id	Description
16.11.4.1.1.5	RNA processing.organelle machinery.pre-mRNA splicing.plastidial RNA splicing.group-II intron splicing.basal splicing factor (RH3)