Gene: TPR.G26871
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G26871
- Transcript Identifier TPR.T27788
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG2 : 6465695-6469305 : negative
Gene Family Information
- ID HOM05D003382
- #Genes/#Species 203/93
- Phylogenetic origin
- ID ORTHO05D003930
- #Genes/#Species 198/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA27788.v2
- id Tp57577_TGAC_v2_gene26871.v2
- pacid 35971727
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT4G36890 |
| GO:0010246 | ISO | PLAZA Integrative Orthology | rhamnogalacturonan I biosynthetic process | AT4G36890 |
| GO:0048354 | ISO | PLAZA Integrative Orthology | mucilage biosynthetic process involved in seed coat development | AT4G36890 |
| GO:0048367 | ISO | PLAZA Integrative Orthology | shoot system development | AT4G36890 |
| GO:0010417 | ISO | PLAZA Integrative Orthology | glucuronoxylan biosynthetic process | AT5G67230 |
| GO:0045491 | ISO | PLAZA Integrative Orthology | xylan metabolic process | AT4G36890 |
| GO:0048358 | ISO | PLAZA Integrative Orthology | mucilage pectin biosynthetic process | AT4G36890 |
| GO:0080001 | ISO | PLAZA Integrative Orthology | mucilage extrusion from seed coat | AT4G36890 |
| GO:0010051 | ISO | PLAZA Integrative Orthology | xylem and phloem pattern formation | AT4G36890 |
| GO:0010154 | ISO | PLAZA Integrative Orthology | fruit development | AT4G36890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042285 | ISO | PLAZA Integrative Orthology | xylosyltransferase activity | AT5G67230 |
| GO:0015018 | IEA | InterPro | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | |
| GO:0047517 | ISO | PLAZA Integrative Orthology | 1,4-beta-D-xylan synthase activity | AT4G36890 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT4G36890 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT4G36890 |
| GO:0000138 | ISO | PLAZA Integrative Orthology | Golgi trans cisterna | AT4G36890 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT5G67230 |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.3.3 | Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX14) |