Gene: TPR.G25710

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G25710
  • Transcript Identifier TPR.T26590
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_169 : 348738-348941 : negative

Gene Family Information

  • ID HOM05D000890
  • #Genes/#Species 673/80
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA26590.v2
  • id Tp57577_TGAC_v2_gene25710.v2
  • pacid 35952980

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009767
ISO
PLAZA Homology (enrichment)photosynthetic electron transport chain HOM05D000890
GO:0009772
IEA
InterProphotosynthetic electron transport in photosystem II
GO:0009769
ISO
PLAZA Integrative Orthologyphotosynthesis, light harvesting in photosystem II ATCG00270
GO:0019684
IEA
InterProphotosynthesis, light reaction

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016168
ISO
PLAZA Homology (enrichment)chlorophyll binding HOM05D000890
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding ATCG00270
GO:0045157
ISO
PLAZA Integrative Orthologyelectron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity ATCG00270
GO:0045156
IEA
InterProelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010287
ISO
PLAZA Integrative Orthologyplastoglobule ATCG00270
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D000890
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00270
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid ATCG00270
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane ATCG00270
GO:0009521
ISO
PLAZA Homology (enrichment)photosystem HOM05D000890
GO:0009523
ISO
PLAZA Integrative Orthologyphotosystem II ATCG00270
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid ATCG00270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036854 Photosystem II protein D1/D2 superfamily
IPR000484 Photosynthetic reaction centre, L/M
Mapman id Description
35.1 not assigned.annotated