Gene: TPR.G21425
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G21425
- Transcript Identifier TPR.T22157
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG5 : 11143580-11150292 : positive
Gene Family Information
- ID HOM05D000109
- #Genes/#Species 3058/96
- Phylogenetic origin
- ID ORTHO05D000210
- #Genes/#Species 1382/87
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA22157.v2
- id Tp57577_TGAC_v2_gene21425.v2
- pacid 35983325
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT3G04110 |
| GO:0006813 | ISO | PLAZA Integrative Orthology | potassium ion transport | AT3G04110 |
| GO:0006814 | ISO | PLAZA Integrative Orthology | sodium ion transport | AT3G04110 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT3G04110 |
| GO:0006816 | ISO | PLAZA Integrative Orthology | calcium ion transport | AT3G04110 |
| GO:0030003 | ISO | PLAZA Integrative Orthology | cellular cation homeostasis | AT3G04110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015276 | IEA | InterPro | ligand-gated ion channel activity | |
| GO:0008066 | ISO | PLAZA Integrative Orthology | glutamate receptor activity | Solyc06g063210.3 |
| GO:0005262 | ISO | PLAZA Integrative Orthology | calcium channel activity | AT3G04110 |
| GO:0005272 | ISO | PLAZA Integrative Orthology | sodium channel activity | AT3G04110 |
| GO:0005261 | ISO | PLAZA Integrative Orthology | cation channel activity | AT3G04110 |
| GO:0005267 | ISO | PLAZA Integrative Orthology | potassium channel activity | AT3G04110 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G31710 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G29120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001320 | Ionotropic glutamate receptor |
| IPR001828 | Receptor, ligand binding region |
| IPR028082 | Periplasmic binding protein-like I |
| IPR017103 | Ionotropic glutamate receptor, plant |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF |
| IPR044440 | Plant glutamate receptor, periplasmic ligand-binding domain |
| Mapman id | Description |
|---|---|
| 24.3.9 | Solute transport.channels.ligand-gated cation channel (GLR) |