Gene: TPR.G12789
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G12789
- Transcript Identifier TPR.T13207
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG3 : 2214679-2218012 : negative
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA13207.v2
- id Tp57577_TGAC_v2_gene12789.v2
- pacid 35988721
- uniprot A0A2K3MXV9
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT5G61840 |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT5G61840 |
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT5G61840 |
| GO:0010417 | ISO | PLAZA Integrative Orthology | glucuronoxylan biosynthetic process | AT5G61840 |
| GO:0006486 | IEA | GOA Database | protein glycosylation | |
| GO:0006486 | IEA | InterPro | protein glycosylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0047517 | ISO | PLAZA Integrative Orthology | 1,4-beta-D-xylan synthase activity | AT5G61840 |
| GO:0080116 | ISO | PLAZA Integrative Orthology | glucuronoxylan glucuronosyltransferase activity | AT5G61840 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0016757 | IEA | GOA Database | glycosyltransferase activity | |
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G61840 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G61840 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.3.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX10) |