Gene: THA.LOC104820130

General Information

Structural Information

  • Species Tarenaya hassleriana
  • Gene Identifier THA.LOC104820130
  • Transcript Identifier THA.XM_010550502.2
  • Gene Type Coding gene
  • Location NW_010966177.1 : 3272319-3275459 : positive

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • GeneID 104820130
  • RefSeq XP_010548804.2
  • RefSeq XM_010550502.2
  • tid rna24983
  • id gene16191
  • gene LOC104820130

Descriptions

  • Description polygalacturonase QRT2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0045490
ISO
PLAZA Integrative Orthologypectin catabolic process AT3G07970
GO:0048235
ISO
PLAZA Integrative Orthologypollen sperm cell differentiation AT3G07970
GO:0009830
ISO
PLAZA Integrative Orthologycell wall modification involved in abscission AT3G07970
GO:0009901
ISO
PLAZA Integrative Orthologyanther dehiscence AT3G07970
GO:0010047
ISO
PLAZA Integrative Orthologyfruit dehiscence AT3G07970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011050 Pectin lyase fold/virulence factor
IPR012334 Pectin lyase fold
IPR006626 Parallel beta-helix repeat
IPR000743 Glycoside hydrolase, family 28
Mapman id Description
21.3.5.1.1 Cell wall organisation.pectin.modification and degradation.polygalacturonase activities.polygalacturonase (QRT2)