Gene: THA.LOC104809307

General Information

Structural Information

Species Tarenaya hassleriana
Gene Identifier THA.LOC104809307
Transcript Identifier THA.XM_010535250.1
Gene Type Coding gene
Location NW_010960187.1 : 3848723-3851398 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

GeneID 104809307
RefSeq XP_010533552.1
RefSeq XM_010535250.1
tid rna1189
id gene804
gene LOC104809307

Descriptions

Short descriptions
Ortholog descriptions

Description pentatricopeptide repeat-containing protein At1g19720

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	InterPro	zinc ion binding
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT1G19720

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G19720
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT1G19720
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G19720

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
16.11.3.3.4.32	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (DYW7)