Gene: TAR376G0937
General Information
Structural Information
- Species Trochodendron aralioides
- Gene Identifier TAR376G0937
- Transcript Identifier TAR376G0937.1
- Gene Type Coding gene
- Location group14 : 1140768-1170812 : negative
Gene Family Information
- ID HOM05D000567
- #Genes/#Species 974/95
- Phylogenetic origin
- ID ORTHO05D001981
- #Genes/#Species 330/90
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id evm.TU.group14.29
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
GO:0010629 | ISO | PLAZA Integrative Orthology | negative regulation of gene expression | AT4G16430 |
GO:2000022 | ISO | PLAZA Integrative Orthology | regulation of jasmonic acid mediated signaling pathway | Solyc06g083980.3 |
GO:0031347 | ISO | PLAZA Integrative Orthology | regulation of defense response | Solyc06g083980.3 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046983 | IEA | InterPro | protein dimerization activity | |
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G16430 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT4G16430 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
IPR025610 | Transcription factor MYC/MYB N-terminal |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR000504 | RNA recognition motif domain |
IPR035979 | RNA-binding domain superfamily |
IPR036638 | Helix-loop-helix DNA-binding domain superfamily |
IPR045084 | Transcription factor AIB/MYC-like |
Mapman id | Description |
---|---|
15.5.30 | RNA biosynthesis.transcriptional regulation.transcription factor (bHLH) |