Gene: TAR371G0534
General Information
Structural Information
- Species Trochodendron aralioides
- Gene Identifier TAR371G0534
- Transcript Identifier TAR371G0534.1
- Gene Type Coding gene
- Location group13 : 44387122-44413636 : negative
Gene Family Information
- ID HOM05D000168
- #Genes/#Species 2245/96
- Phylogenetic origin
- ID ORTHO05D000811
- #Genes/#Species 602/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id evm.TU.group13.1208
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034504 | ISO | PLAZA Integrative Orthology | protein localization to nucleus | AT5G16000 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT5G16000 |
| GO:0046777 | ISO | PLAZA Integrative Orthology | protein autophosphorylation | AT5G16000 |
| GO:0048653 | ISO | PLAZA Integrative Orthology | anther development | AT1G60800 |
| GO:0010939 | ISO | PLAZA Integrative Orthology | regulation of necrotic cell death | AT5G16000 |
| GO:0007639 | ISO | PLAZA Integrative Orthology | homeostasis of number of meristem cells | AT1G60800 |
| GO:0040015 | ISO | PLAZA Integrative Orthology | negative regulation of multicellular organism growth | AT5G16000 |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT5G16000 |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0015026 | ISO | PLAZA Integrative Orthology | coreceptor activity | AT1G60800 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | InterPro | protein kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT5G16000 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G16000 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G16000 |
| GO:0005730 | IEA | InterPro | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002415 | H/ACA ribonucleoprotein complex, subunit Nhp2, eukaryote |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR000719 | Protein kinase domain |
| IPR013210 | Leucine-rich repeat-containing N-terminal, plant-type |
| IPR029064 | 50S ribosomal protein L30e-like |
| IPR004038 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 |
| IPR032675 | Leucine-rich repeat domain superfamily |
| IPR001611 | Leucine-rich repeat |
| IPR018492 | Ribosomal protein L7Ae/L8/Nhp2 family |
| Mapman id | Description |
|---|---|
| 16.2.1.3.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).protein factor (NHP2L1/SNU13) |
| 18.4.1.2 | Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-II) |