Gene: Sp6g23950

General Information

Structural Information

  • Species Schrenkiella parvula
  • Gene Identifier Sp6g23950
  • Transcript Identifier Sp6g23950.1
  • Gene Type Coding gene
  • Location ch6-6 : 4908890-4911580 : positive

Gene Family Information

  • ID HOM05D000544
  • #Genes/#Species 1005/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Sp6g23950.v2.2
  • pacid 45080713

Descriptions

  • Description PTHR12321:SF61 - PHD FINGER PROTEIN ALFIN-LIKE 5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G20510
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G20510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042393
IEA
InterProhistone binding
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT5G20510
GO:0003714
ISO
PLAZA Integrative Orthologytranscription corepressor activity AT5G20510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044104 Alfin1-like, PHD finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001965 Zinc finger, PHD-type
IPR045104 Alfin
IPR011011 Zinc finger, FYVE/PHD-type
IPR021998 Alfin, N-terminal
IPR019787 Zinc finger, PHD-finger
Mapman id Description
12.3.6.2.2 Chromatin organisation.post-translational histone modification.PRC1 bifunctional histone ubiquitination and methylation reader complex.associated factors.methylation reader (Alfin)