Gene: Sp2g03350
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp2g03350
- Transcript Identifier Sp2g03350.1
- Gene Type Coding gene
- Location ch2-2 : 460199-465946 : positive
Gene Family Information
- ID HOM05D000515
- #Genes/#Species 1048/100
- Phylogenetic origin
- ID ORTHO05D001911
- #Genes/#Species 338/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Sp2g03350.v2.2
- pacid 45093817
Descriptions
- Description PF00176//PF00271//PF13923 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009553 | ISO | PLAZA Integrative Orthology | embryo sac development | AT1G61140 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0070615 | IEA | InterPro | nucleosome-dependent ATPase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001841 | Zinc finger, RING-type |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| Mapman id | Description |
|---|---|
| 12.4.8.3.1 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5) |
| 12.4.8.3.3 | Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Ris1) |