Gene: Sp1g27420
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp1g27420
- Transcript Identifier Sp1g27420.1
- Gene Type Coding gene
- Location ch1-1 : 10482850-10486189 : negative
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Sp1g27420.v2.2
- pacid 45095800
Descriptions
- Description PF01301//PF13364 - Glycosyl hydrolases family 35 (Glyco_hydro_35) // Beta-galactosidase jelly roll domain (BetaGal_dom4_5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0030246 | ISO | PLAZA Homology (enrichment) | carbohydrate binding | HOM05D000140 |
| GO:0004565 | ISO | PLAZA Integrative Orthology | beta-galactosidase activity | AT1G31740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR025300 | Beta-galactosidase jelly roll domain |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |