Gene: Sopen12g034210

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g034210
  • Transcript Identifier Sopen12g034210.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 82590894-82595271 : positive

Gene Family Information

  • ID HOM05D002639
  • #Genes/#Species 260/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g034210.1

Descriptions

  • Description EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. | EARLY IN SHORT DAYS 4 (ESD4) | CONTAINS InterPro DOMAIN/s: Peptidase C48, SUMO/Sentrin/Ubl1 | BEST Arabidopsis thaliana protein match is: UB-like protease 1A
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
InterProproteolysis
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G15880
GO:0016926
ISO
PLAZA Integrative Orthologyprotein desumoylation AT3G06910
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G15880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008234
IEA
InterProcysteine-type peptidase activity
GO:0070140
ISO
PLAZA Integrative OrthologySUMO-specific isopeptidase activity AT3G06910
GO:0070139
ISO
PLAZA Integrative OrthologySUMO-specific endopeptidase activity AT4G15880
GO:0019900
ISO
PLAZA Integrative Orthologykinase binding AT4G15880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G15880
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G06910
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G06910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038765 Papain-like cysteine peptidase superfamily
IPR003653 Ulp1 protease family, C-terminal catalytic domain
Mapman id Description
19.2.3.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein deconjugation.SUMO deconjugation.protease (ELS)