Gene: Sopen12g031540

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g031540
  • Transcript Identifier Sopen12g031540.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 80620804-80623865 : positive

Gene Family Information

  • ID HOM05D000557
  • #Genes/#Species 991/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g031540.1

Descriptions

  • Description Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers. | glyceraldehyde-3-phosphate dehydrogenase B subunit (GAPB) | FUNCTIONS IN: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase (NADP ) (phosphorylating) activity, glyceraldehyde-3-phosphate dehydrogenase activity | INVOLVED IN: in 6 processes | LOCATED IN: in 7 components | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily , Glyceraldehyde-3-phosphate dehydrogenase, type I , Glyceraldehyde 3-phosphate dehydrogenase, active site , Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain , Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup , Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain , Protein of unknown function CP12 | BEST Arabidopsis thaliana protein match is: glyceraldehyde 3-phosphate dehydrogenase A subunit
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006006
IEA
InterProglucose metabolic process
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G42970
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G42970
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT1G42970
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose AT1G42970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051287
IEA
InterProNAD binding
GO:0016620
IEA
InterProoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0050661
IEA
InterProNADP binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G42970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G42970
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G42970
GO:0010319
ISO
PLAZA Integrative Orthologystromule AT1G42970
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G42970
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G42970
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G42970

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
IPR036291 NAD(P)-binding domain superfamily
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
IPR003823 Domain of unknown function CP12
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
Mapman id Description
1.2.3 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase