Gene: Sopen12g023090

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g023090
  • Transcript Identifier Sopen12g023090.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 59574926-59582423 : positive

Gene Family Information

  • ID HOM05D000095
  • #Genes/#Species 3348/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g023090.1

Descriptions

  • Description Homeodomain-like superfamily protein | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , Myb, DNA-binding , Zinc finger, CCHC-type , HTH transcriptional regulator, Myb-type, DNA-binding , Myb-like DNA-binding domain, SHAQKYF class | BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Os10g0562100
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated Os10g0562100
GO:0080033
ISO
PLAZA Integrative Orthologyresponse to nitrite AT3G16350
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT3G16350
GO:0009744
ISO
PLAZA Integrative Orthologyresponse to sucrose Os10g0562100

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity Os10g0562100
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G16350
GO:0000987
ISO
PLAZA Integrative Orthologycis-regulatory region sequence-specific DNA binding AT3G16350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017930 Myb domain
IPR001005 SANT/Myb domain
IPR009057 Homeobox-like domain superfamily
IPR006447 Myb domain, plants
Mapman id Description
15.5.2.2 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)